Difference between revisions of "2.4.1.67-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5189 RXN0-5189] == * direction: ** LEFT-TO-RIGHT * common name: ** dna-3-methyladenine_glycosy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.67-RXN 2.4.1.67-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5189 RXN0-5189] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.67-RXN 2.4.1.67-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** dna-3-methyladenine_glycosylase_i
+
−
** 3-methyladenine_dna_glycosylase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.2.20 EC-3.2.2.20]
+
** [http://enzyme.expasy.org/EC/2.4.1.67 EC-2.4.1.67]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-3-methyladenines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[3-Methyl-Adenines]][c]
+
** 1 [[CPD-458]][c] '''+''' 1 [[CPD-1099]][c] '''<=>''' 1 [[CPD-170]][c] '''+''' 1 [[MYO-INOSITOL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N3-methyladenine in DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 3-methyladenine[c]
+
** 1 galactinol[c] '''+''' 1 raffinose[c] '''<=>''' 1 stachyose[c] '''+''' 1 myo-inositol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_15814]]
+
* Gene: [[Tiso_gene_8673]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_7738]]
+
** Source: [[orthology-creinhardtii]]
−
** Source: [[annotation-in-silico_annotation]]
+
* Gene: [[Tiso_gene_16101]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5337]], stachyose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=dna-3-methyladenine_glycosylase_i}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20776 20776]
−
{{#set: common name=3-methyladenine_dna_glycosylase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-3.2.2.20}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03418 R03418]
−
{{#set: gene associated=Tiso_gene_15814|Tiso_gene_7738}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.4.1.67}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_8673|Tiso_gene_16101}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: in pathway=PWY-5337}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:15, 21 March 2018

Reaction 2.4.1.67-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 galactinol[c] + 1 raffinose[c] <=> 1 stachyose[c] + 1 myo-inositol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5337, stachyose biosynthesis: PWY-5337
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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