Difference between revisions of "RXN0-1281"

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(Created page with "Category:Gene == Gene Tiso_gene_16302 == * right end position: ** 4422 * transcription direction: ** POSITIVE * left end position: ** 2491 * centisome position: ** 55.9147...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrouridine synthase **...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16302 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] ==
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* right end position:
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* direction:
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** 4422
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** dihydrouridine synthase
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* left end position:
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** trna-dihydrouridine_synthase
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** 2491
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
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** 55.9147   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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* With identifiers:
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** 1 [[PROTON]][c] '''+''' 1 [[tRNA-uridines]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[tRNA-Dihydrouridines]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 a uridine in tRNA[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a 5,6-dihydrouridine in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8241]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8242]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15285]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_5731]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12147]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15286]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15154]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15890]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4505]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_7714]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15416]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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== External links  ==
 
== External links  ==
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{{#set: right end position=4422}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=dihydrouridine synthase}}
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{{#set: left end position=2491}}
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{{#set: common name=trna-dihydrouridine_synthase}}
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{{#set: centisome position=55.9147    }}
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{{#set: ec number=EC-1.1.1}}
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
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{{#set: gene associated=Tiso_gene_8241|Tiso_gene_8242|Tiso_gene_15285|Tiso_gene_5731|Tiso_gene_12147|Tiso_gene_15286|Tiso_gene_15154|Tiso_gene_15890|Tiso_gene_4505|Tiso_gene_7714|Tiso_gene_15416}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:15, 21 March 2018

Reaction RXN0-1281

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydrouridine synthase
    • trna-dihydrouridine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-1281&oldid=47198"