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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] == | + | == Gene Tiso_gene_8816 == |
| − | * direction: | + | * right end position: |
| − | ** LEFT-TO-RIGHT | + | ** 9275 |
| − | * common name: | + | * transcription direction: |
| − | ** Magnesium chelatase, H subunit | + | ** POSITIVE |
| − | ** h_subunit_of_mg_chelatase | + | * left end position: |
| − | ** magnesium_chelatase | + | ** 8275 |
| − | * ec number: | + | * centisome position: |
| − | ** [http://enzyme.expasy.org/EC/6.6.1.1 EC-6.6.1.1] | + | ** 83.933464 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[3.2.1.78-RXN]] |
| − | ** 1 [[WATER]][c] '''+''' 1 [[MG+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c] '''+''' 1 [[ATP]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 H2O[c] '''+''' 1 Mg2+[c] '''+''' 1 protoporphyrin IX[c] '''+''' 1 ATP[c] '''=>''' 3 H+[c] '''+''' 1 Mg-protoporphyrin[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_11960]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_5993]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: AUTOMATED-NAME-MATCH
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_9870]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
| + | |
| − | ** '''4''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
| + | |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[pathwaytools]] | + | *** Assignment: automated-name-match |
| | + | == Pathways associated == |
| | + | * [[PWY-7456]] |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: right end position=9275}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13961 13961]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: left end position=8275}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03877 R03877]
| + | {{#set: centisome position=83.933464 }} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reaction associated=3.2.1.78-RXN}} |
| − | {{#set: common name=Magnesium chelatase, H subunit}} | + | {{#set: pathway associated=PWY-7456}} |
| − | {{#set: common name=h_subunit_of_mg_chelatase}} | + | |
| − | {{#set: common name=magnesium_chelatase}} | + | |
| − | {{#set: ec number=EC-6.6.1.1}} | + | |
| − | {{#set: gene associated=Tiso_gene_11960|Tiso_gene_5993|Tiso_gene_9870}} | + | |
| − | {{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
