Difference between revisions of "RXN-12244"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.106-RXN 3.2.1.106-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannosyl-oligosacch...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] == * direction: ** LEFT-TO-RIGHT * common name: ** 15-cis-phytoene desaturase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.106-RXN 3.2.1.106-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** mannosyl-oligosaccharide_glucosidase
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** 15-cis-phytoene desaturase
* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.106 EC-3.2.1.106]
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* Synonym(s):
 
* Synonym(s):
 +
** phytoene desaturase (ambiguous)
 +
** PDS
 +
** plant-type phytoene desaturase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-13936]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13937]][c] '''+''' 1 [[Glucopyranose]][c]
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** 1 [[PLASTOQUINONE]][c] '''+''' 1 [[CPD-13171]][c] '''=>''' 1 [[Plastoquinols]][c] '''+''' 1 [[CPD-7535]][c]
 
* With common name(s):
 
* With common name(s):
** 1 Glc3Man9GlcNAc2[c] '''+''' 1 H2O[c] '''=>''' 1 Glc2Man9GlcNAc2[c] '''+''' 1 D-glucopyranose[c]
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** 1 a plastoquinone[c] '''+''' 1 15,9'-di-cis-phytofluene[c] '''=>''' 1 a plastoquinol[c] '''+''' 1 9,15,9'-tri-cis-ζ-carotene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Tiso_gene_12662]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-esiliculosus]]
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** Source: [[manual-reactions_pwy-6475_tiso_add]]
*** Tool: [[pantograph]]
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*** Comment: [[reaction added to complete pwy-6475]]
* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* UNIPROT:
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* RHEA:
** [http://www.uniprot.org/uniprot/O14255 O14255]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=mannosyl-oligosaccharide_glucosidase}}
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{{#set: common name=15-cis-phytoene desaturase}}
{{#set: ec number=EC-3.2.1.106}}
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{{#set: common name=phytoene desaturase (ambiguous)|PDS|plant-type phytoene desaturase}}
{{#set: gene associated=Tiso_gene_12662}}
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{{#set: in pathway=PWY-6475}}
{{#set: in pathway=}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=manual-reactions_pwy-6475_tiso_add}}
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction comment=reaction added to complete pwy-6475}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:16, 21 March 2018

Reaction RXN-12244

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 15-cis-phytoene desaturase
  • Synonym(s):
    • phytoene desaturase (ambiguous)
    • PDS
    • plant-type phytoene desaturase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a plastoquinone[c] + 1 15,9'-di-cis-phytofluene[c] => 1 a plastoquinol[c] + 1 9,15,9'-tri-cis-ζ-carotene[c]

Genes associated with this reaction

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links