Difference between revisions of "RXN-698"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_9602 == * right end position: ** 5695 * transcription direction: ** POSITIVE * left end position: ** 3904 * centisome position: ** 42.45324...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-698 RXN-698] == * direction: ** LEFT-TO-RIGHT * common name: ** 9-cis-epoxycarotenoid_dioxygena...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-698 RXN-698] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** 9-cis-epoxycarotenoid_dioxygenase |
| − | + | ** 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/1.13.11.51 EC-1.13.11.51] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[CPD-7424]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD1F-4]][c] '''+''' 1 [[CPD-7279]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 9'-cis-neoxanthin[c] '''+''' 1 oxygen[c] '''=>''' 1 (3S,5R,6R)-3,5-dihydroxy-6,7-didehydro-5,6-dihydro-12'-apo-β-caroten-12'-al[c] '''+''' 1 2-cis,4-trans-xanthoxin[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_4653]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_7740]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-695]], abscisic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-695 PWY-695] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
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== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19677 19677] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06952 R06952] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: pathway | + | {{#set: common name=9-cis-epoxycarotenoid_dioxygenase}} |
| + | {{#set: common name=9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein}} | ||
| + | {{#set: ec number=EC-1.13.11.51}} | ||
| + | {{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}} | ||
| + | {{#set: in pathway=PWY-695}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:18, 21 March 2018
Contents
Reaction RXN-698
- direction:
- LEFT-TO-RIGHT
- common name:
- 9-cis-epoxycarotenoid_dioxygenase
- 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-7424[c] + 1 OXYGEN-MOLECULE[c] => 1 CPD1F-4[c] + 1 CPD-7279[c]
- With common name(s):
- 1 9'-cis-neoxanthin[c] + 1 oxygen[c] => 1 (3S,5R,6R)-3,5-dihydroxy-6,7-didehydro-5,6-dihydro-12'-apo-β-caroten-12'-al[c] + 1 2-cis,4-trans-xanthoxin[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4653
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7740
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
