Difference between revisions of "CPD-9965"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-binding_protein * Synon...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9965 CPD-9965] == * smiles: ** CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9965 CPD-9965] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
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** CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
** gtp-binding_protein
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** icosanoyl-CoA
 +
* inchi key:
 +
** InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J
 +
* molecular weight:
 +
** 1058.022   
 
* Synonym(s):
 
* Synonym(s):
 +
** eicosanoyl-CoA
 +
** arachidoyl-CoA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-13295]]
** 1 [[5-Phospho-RNA]][c] '''+''' 1 [[RNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[RNA-Ligase-L-lysine]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c]
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* [[RXN-9629]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 2 H+[c] '''=>''' 1 an [RNA ligase]-L-lysine[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA][c]
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* [[RXN-13306]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[RXN1G-460]]
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8397]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8396]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8398]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=gtp-binding_protein}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203411 25203411]
{{#set: gene associated=Tiso_gene_8397|Tiso_gene_8396|Tiso_gene_8398}}
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* HMDB : HMDB04258
{{#set: in pathway=}}
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* CHEBI:
{{#set: reconstruction category=annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57380 57380]
{{#set: reconstruction source=annotation-in-silico_annotation}}
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* LIGAND-CPD:
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02041 C02041]
 +
{{#set: smiles=CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
 +
{{#set: common name=icosanoyl-CoA}}
 +
{{#set: inchi key=InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J}}
 +
{{#set: molecular weight=1058.022    }}
 +
{{#set: common name=eicosanoyl-CoA|arachidoyl-CoA}}
 +
{{#set: consumed by=RXN-13295|RXN-9629}}
 +
{{#set: produced by=RXN-13306}}
 +
{{#set: reversible reaction associated=RXN1G-460}}

Latest revision as of 20:18, 21 March 2018

Metabolite CPD-9965

  • smiles:
    • CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • icosanoyl-CoA
  • inchi key:
    • InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J
  • molecular weight:
    • 1058.022
  • Synonym(s):
    • eicosanoyl-CoA
    • arachidoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.