Difference between revisions of "DEOXY-D-RIBOSE-1-PHOSPHATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparaginase * ec...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] == * smiles: ** C1(C(O)C(CO)OC1OP(=O)([O...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
 
* common name:
 
* common name:
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** asparaginase
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** 2-deoxy-α-D-ribose 1-phosphate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
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** InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
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** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
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* molecular weight:
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** 212.096   
 
* Synonym(s):
 
* Synonym(s):
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** deoxy-D-ribose 1-phosphate
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** 2-deoxy-D-ribose-1-phosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[THYM-PHOSPH-RXN]]
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** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 L-aspartate[c] '''+''' 1 ammonium[c]
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* [[URA-PHOSPH-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3570]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_19398]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17477]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21016 21016]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23419734 23419734]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
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** [http://www.chemspider.com/Chemical-Structure.10461471.html 10461471]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P06608 P06608]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57259 57259]
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** [http://www.uniprot.org/uniprot/P26900 P26900]
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* BIGG : 2dr1p
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** [http://www.uniprot.org/uniprot/P43843 P43843]
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* HMDB : HMDB01351
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** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
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{{#set: smiles=C1(C(O)C(CO)OC1OP(=O)([O-])[O-])}}
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** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
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{{#set: common name=2-deoxy-α-D-ribose 1-phosphate}}
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** [http://www.uniprot.org/uniprot/O25424 O25424]
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{{#set: inchi key=InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L}}
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** [http://www.uniprot.org/uniprot/P37595 P37595]
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{{#set: molecular weight=212.096    }}
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** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
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{{#set: common name=deoxy-D-ribose 1-phosphate|2-deoxy-D-ribose-1-phosphate}}
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** [http://www.uniprot.org/uniprot/O34482 O34482]
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{{#set: reversible reaction associated=THYM-PHOSPH-RXN|URA-PHOSPH-RXN}}
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** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
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** [http://www.uniprot.org/uniprot/O57797 O57797]
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** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
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** [http://www.uniprot.org/uniprot/P30363 P30363]
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** [http://www.uniprot.org/uniprot/P30362 P30362]
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** [http://www.uniprot.org/uniprot/P30364 P30364]
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** [http://www.uniprot.org/uniprot/P38986 P38986]
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** [http://www.uniprot.org/uniprot/P50287 P50287]
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** [http://www.uniprot.org/uniprot/P11163 P11163]
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** [http://www.uniprot.org/uniprot/P50286 P50286]
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** [http://www.uniprot.org/uniprot/P87015 P87015]
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** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
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** [http://www.uniprot.org/uniprot/P00805 P00805]
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** [http://www.uniprot.org/uniprot/P0A962 P0A962]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=asparaginase}}
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{{#set: ec number=EC-3.5.1.38}}
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{{#set: ec number=EC-3.5.1.1}}
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{{#set: gene associated=Tiso_gene_3570|Tiso_gene_19398|Tiso_gene_17477}}
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{{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY|ASPARAGINE-DEG1-PWY-1}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:40, 21 March 2018

Metabolite DEOXY-D-RIBOSE-1-PHOSPHATE

  • smiles:
    • C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
  • common name:
    • 2-deoxy-α-D-ribose 1-phosphate
  • inchi key:
    • InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
  • molecular weight:
    • 212.096
  • Synonym(s):
    • deoxy-D-ribose 1-phosphate
    • 2-deoxy-D-ribose-1-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(C(O)C(CO)OC1OP(=O)([O-])[O-])" cannot be used as a page name in this wiki.



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