Difference between revisions of "Tiso gene 19431"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_19431 == * right end position: ** 2327 * transcription direction: ** POSITIVE * left end position: ** 119 * centisome position: ** 5.109489...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] ==
+
== Gene Tiso_gene_19431 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 2327
* ec number:
+
* transcription direction:
** [http://enzyme.expasy.org/EC/1.2.1.44 EC-1.2.1.44]
+
** POSITIVE
 +
* left end position:
 +
** 119
 +
* centisome position:
 +
** 5.109489   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[FERULOYL-COA]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c]
+
** Source: [[annotation-in-silico_annotation]]
* With common name(s):
+
*** Assignment: ec-number
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 feruloyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 coenzyme A[c] '''+''' 1 coniferaldehyde[c]
+
** Source: [[annotation-experimental_annotation]]
 
+
*** Assignment: ec-number
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* Gene: [[Tiso_gene_11016]]
+
** Source: [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_15272]]
+
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_9504]]
+
** Source: [[orthology-esiliculosus]]
+
== Pathways  ==
+
* [[PWY-6027]], capsiconiate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6027 PWY-6027]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
+
** '''7''' reactions found over '''15''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-athaliana]]
+
*** Tool: [[pantograph]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
+
== Pathways associated ==
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: right end position=2327}}
** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
+
{{#set: transcription direction=POSITIVE}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=119}}
{{#set: ec number=EC-1.2.1.44}}
+
{{#set: centisome position=5.109489    }}
{{#set: gene associated=Tiso_gene_11016|Tiso_gene_15272|Tiso_gene_9504}}
+
{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
{{#set: in pathway=PWY-6027|PWY-361}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:18, 21 March 2018

Gene Tiso_gene_19431

  • right end position:
    • 2327
  • transcription direction:
    • POSITIVE
  • left end position:
    • 119
  • centisome position:
    • 5.109489
  • Synonym(s):

Reactions associated

Pathways associated

External links