Difference between revisions of "GLUTAMATE-SYNTHASE-FERREDOXIN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATDTDm ATDTDm] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:dTDP phosphotransferase, mito...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIG...") |
||
Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** ferredoxin-dependent_glutamate_synthase |
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 | + | ** 1 [[2-KETOGLUTARATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 2-oxoglutarate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 L-glutamine[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[Tiso_gene_1773]] |
− | ** Source: [[orthology- | + | ** Source: [[annotation-in-silico_annotation]] |
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[Tiso_gene_2581]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_1154]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
− | ** Source: [[orthology- | + | ** Source: [[orthology-athaliana]] |
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P23225 P23225] | ||
+ | ** [http://www.uniprot.org/uniprot/O67512 O67512] | ||
+ | ** [http://www.uniprot.org/uniprot/P96218 P96218] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06434 Q06434] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43081 Q43081] | ||
+ | ** [http://www.uniprot.org/uniprot/P55037 P55037] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43155 Q43155] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M242 Q7M242] | ||
+ | ** [http://www.uniprot.org/uniprot/P51375 P51375] | ||
+ | ** [http://www.uniprot.org/uniprot/P55038 P55038] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08258 Q08258] | ||
+ | ** [http://www.uniprot.org/uniprot/O49154 O49154] | ||
+ | ** [http://www.uniprot.org/uniprot/O19906 O19906] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=ferredoxin-dependent_glutamate_synthase}} |
− | {{#set: gene associated= | + | {{#set: ec number=EC-1.4.7.1}} |
− | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_1773|Tiso_gene_2581|Tiso_gene_1154}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}} |
− | {{#set: reconstruction source=orthology- | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}} |
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 20:21, 21 March 2018
Contents
Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ferredoxin-dependent_glutamate_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 2-KETOGLUTARATE[c] + 2 Reduced-ferredoxins[c] + 2 PROTON[c] + 1 GLN[c] => 2 Oxidized-ferredoxins[c] + 2 GLT[c]
- With common name(s):
- 1 2-oxoglutarate[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 2 H+[c] + 1 L-glutamine[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 2 L-glutamate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1773
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2581
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_1154
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: annotation-experimental_annotation
Pathways
- PWY-6964, ammonia assimilation cycle II: PWY-6964
- 2 reactions found over 2 reactions in the full pathway
- PWY-4341, L-glutamate biosynthesis V: PWY-4341
- 1 reactions found over 1 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III: PWY-6549
- 6 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- LIGAND-RXN:
- UNIPROT: