Difference between revisions of "RXN-8350"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-AMP PHOSPHORIBOSYL-AMP] == * smiles: ** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-AMP PHOSPHORIBOSYL-AMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] ==
* smiles:
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* direction:
** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP([O-])(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** 1-(5-phospho-β-D-ribosyl)-AMP
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** [http://enzyme.expasy.org/EC/1.14.19.30 EC-1.14.19.30]
* inchi key:
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** InChIKey=RTQMRTSPTLIIHM-KEOHHSTQSA-J
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* molecular weight:
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** 555.288   
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* Synonym(s):
 
* Synonym(s):
** 1-(5-phosphoribosyl)-AMP
 
** phosphoribosyl-AMP
 
** 5-phosphoribosyl-AMP
 
** N-(5-phospho-D-ribosyl)-AMP
 
** N-(5'-phospho-D-ribosyl)-AMP
 
** N1-(5-phospho-D-ribosyl)-AMP
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[HISTCYCLOHYD-RXN]]
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* With identifiers:
* [[PRACH]]
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** 2 [[PROTON]][c] '''+''' 1 [[CPD-17281]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-17282]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
== Reaction(s) known to produce the compound ==
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* With common name(s):
* [[HISTPRATPHYD-RXN]]
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** 2 H+[c] '''+''' 1 a [glycerolipid]-icosatetraenoate[c] '''+''' 1 oxygen[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 H2O[c] '''+''' 1 a [glycerolipid]-icosapentaenoate[c] '''+''' 2 a ferricytochrome b5[c]
* [[PRADP]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.genome.jp/dbget-bin/www_bget?C02741 C02741]
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{{#set: ec number=EC-1.14.19.30}}
* HMDB : HMDB12276
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{{#set: in pathway=PWY-7602|PWY-6958}}
* CHEBI:
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{{#set: reconstruction category=annotation}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=59457 59457]
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{{#set: reconstruction source=annotation-in-silico_annotation}}
* BIGG : prbamp
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{{#set: reconstruction tool=pathwaytools}}
* PUBCHEM:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45480652 45480652]
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{{#set: smiles=C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP([O-])(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O}}
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{{#set: common name=1-(5-phospho-β-D-ribosyl)-AMP}}
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{{#set: inchi key=InChIKey=RTQMRTSPTLIIHM-KEOHHSTQSA-J}}
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{{#set: molecular weight=555.288    }}
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{{#set: common name=1-(5-phosphoribosyl)-AMP|phosphoribosyl-AMP|5-phosphoribosyl-AMP|N-(5-phospho-D-ribosyl)-AMP|N-(5'-phospho-D-ribosyl)-AMP|N1-(5-phospho-D-ribosyl)-AMP}}
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{{#set: consumed by=HISTCYCLOHYD-RXN|PRACH}}
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{{#set: produced by=HISTPRATPHYD-RXN|PRADP}}
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Latest revision as of 20:21, 21 March 2018

Reaction RXN-8350

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links