Difference between revisions of "5.3.1.23-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13733 RXN-13733] == * direction: ** REVERSIBLE * common name: ** alkaline_dihydroceramidase * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13733 RXN-13733] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** alkaline_dihydroceramidase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
+
** [http://enzyme.expasy.org/EC/5.3.1.23 EC-5.3.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD3DJ-82]][c] '''<=>''' 1 [[CPD-13612]][c] '''+''' 1 [[Carboxylates]][c]
+
** 1 [[CPD-444]][c] '''=>''' 1 [[CPD-1063]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a dihydroceramide[c] '''<=>''' 1 D-erythro-sphinganine[c] '''+''' 1 a carboxylate[c]
+
** 1 S-methyl-5-thio-&alpha;-D-ribose 1-phosphate[c] '''=>''' 1 5-methylthioribulose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14341]]
+
* Gene: [[Tiso_gene_3805]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-synechocystis]]
−
* Gene: [[Tiso_gene_4555]]
+
* Gene: [[Tiso_gene_18341]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-synechocystis]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
+
* [[PWY-7174]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7174 PWY-7174]
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4361]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=alkaline_dihydroceramidase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19989 19989]
−
{{#set: ec number=EC-3.5.1.23}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_14341|Tiso_gene_4555}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04420 R04420]
−
{{#set: in pathway=PWY-7119}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: ec number=EC-5.3.1.23}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: gene associated=Tiso_gene_3805|Tiso_gene_18341}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: in pathway=PWY-7174|PWY-4361}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:21, 21 March 2018

Reaction 5.3.1.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 S-methyl-5-thio-α-D-ribose 1-phosphate[c] => 1 5-methylthioribulose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7174, S-methyl-5-thio-α-D-ribose 1-phosphate degradation II: PWY-7174
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation: PWY-4361
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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