Difference between revisions of "Tiso gene 20327"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7771 RXN-7771] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.1.3...")
(Created page with "Category:Gene == Gene Tiso_gene_20327 == * right end position: ** 298 * transcription direction: ** POSITIVE * left end position: ** 141 * centisome position: ** 9.337749...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7771 RXN-7771] ==
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== Gene Tiso_gene_20327 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 298
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.1.3 EC-5.1.3]
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** POSITIVE
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* left end position:
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** 141
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* centisome position:
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** 9.337749   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[CPD-7078]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 GDP-&alpha;-D-mannose[c] '''<=>''' 1 GDP-&beta;-L-gulose[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* Gene: [[Tiso_gene_6621]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-12196]]
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* [[PWY4FS-11]], L-ascorbate biosynthesis II (L-gulose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-11 PWY4FS-11]
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** Source: [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-5115]], GDP-L-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115]
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* Reaction: [[RXN0-5462]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7184]]
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*** Tool: [[pantograph]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=298}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07672 R07672]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=141}}
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{{#set: ec number=EC-5.1.3}}
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{{#set: centisome position=9.337749    }}
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{{#set: gene associated=Tiso_gene_6621}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: in pathway=PWY4FS-11|PWY-5115}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_20327

  • right end position:
    • 298
  • transcription direction:
    • POSITIVE
  • left end position:
    • 141
  • centisome position:
    • 9.337749
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20327&oldid=48363"