Difference between revisions of "Tiso gene 11923"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
(Created page with "Category:Gene == Gene Tiso_gene_11923 == * right end position: ** 4803 * transcription direction: ** NEGATIVE * left end position: ** 28 * centisome position: ** 0.3775111...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] ==
+
== Gene Tiso_gene_11923 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 4803
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** NEGATIVE
 +
* left end position:
 +
** 28
 +
* centisome position:
 +
** 0.3775111   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPASE-RXN]]
−
** 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 trans-2,3-dehydroadipyl-coA[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_5857]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_14257]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=4803}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=28}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
+
{{#set: centisome position=0.3775111    }}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reaction associated=ATPASE-RXN}}
−
{{#set: ec number=EC-4.2.1.17}}
+
−
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14257}}
+
−
{{#set: in pathway=PWY-1361|PWY0-321}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_11923

  • right end position:
    • 4803
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 28
  • centisome position:
    • 0.3775111
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11923&oldid=48492"