Difference between revisions of "RXN-17799"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** queuine_trna-ribosyltransfe...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-ketoacyl-_thiolase ** ace...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** queuine_trna-ribosyltransferase
+
** 3-ketoacyl-_thiolase
 +
** acetyl-_c-acetyltransferase
 +
** thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-19153]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-14925]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 preQ1[c] '''+''' 1 a guanine34 in tRNA[c] '''=>''' 1 guanine[c] '''+''' 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c]
+
** 1 coenzyme A[c] '''+''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis-decenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_18857]]
+
* Gene: [[Tiso_gene_17451]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* Gene: [[Tiso_gene_17]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3856]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_3855]]
−
* Gene: [[Tiso_gene_12326]]
+
** Source: [[annotation-in-silico_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=queuine_trna-ribosyltransferase}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: ec number=EC-2.4.2.29}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: gene associated=Tiso_gene_18857|Tiso_gene_17|Tiso_gene_12326}}
+
{{#set: common name=thiolase}}
−
{{#set: in pathway=PWY-6700}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_10116}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction RXN-17799

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-ketoacyl-_thiolase
    • acetyl-_c-acetyltransferase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 3-oxo-(5Z)-dodecenoyl-CoA[c] => 1 acetyl-CoA[c] + 1 3-cis-decenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17799&oldid=48629"