Difference between revisions of "RXN-15013"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15013 RXN-15013] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12483]][c]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-15900]][c] '''<=>''' 1 [[3-HYDROXYPIMELYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 paraxanthine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 1,7-dimethylurate[c]
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** 1 H2O[c] '''+''' 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] '''<=>''' 1 3-hydroxypimeloyl-CoA[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_11775]]
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* Gene: [[Tiso_gene_7477]]
** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=CENTBENZCOA-PWY CENTBENZCOA-PWY]
** '''4''' reactions found over '''5''' reactions in the full pathway
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** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
 +
** '''5''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-athaliana]]
*** [[athaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
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{{#set: gene associated=Tiso_gene_7477}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: in pathway=CENTBENZCOA-PWY|PWY-7401}}
{{#set: gene associated=Tiso_gene_11775}}
+
{{#set: in pathway=PWY-6632}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=athaliana}}
 

Latest revision as of 19:41, 21 March 2018

Reaction RXN-15013

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA[c] <=> 1 3-hydroxypimeloyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CENTBENZCOA-PWY, benzoyl-CoA degradation II (anaerobic): CENTBENZCOA-PWY
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate): PWY-7401
    • 5 reactions found over 17 reactions in the full pathway

Reconstruction information

External links