Difference between revisions of "RXN-12195"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12195 RXN-12195] == * direction: ** LEFT-TO-RIGHT * common name: ** helicase_mov-10-_-like ** h...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12195 RXN-12195] == * direction: ** LEFT-TO-RIGHT * common name: ** helicase_mov-10-_-like ** h...")
 
(3 intermediate revisions by the same user not shown)
Line 44: Line 44:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CTP[c] '''+''' 1 H2O[c] '''=>''' 1 CDP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
+
** 1 CTP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 CDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7734]]
+
* Gene: [[Tiso_gene_1960]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_4194]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_11098]]
−
* [[Tiso_gene_13738]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_1959]]
+
* Gene: [[Tiso_gene_12899]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_1960]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_2924]]
−
* [[Tiso_gene_2924]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14226]]
−
* [[Tiso_gene_7123]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_674]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_10221]]
+
* Gene: [[Tiso_gene_8601]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_12899]]
+
* Gene: [[Tiso_gene_8584]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_9959]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13264]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_2929]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2897]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_9423]]
−
* [[Tiso_gene_7387]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_873]]
−
* [[Tiso_gene_13268]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_8763]]
−
* [[Tiso_gene_8461]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_9004]]
−
* [[Tiso_gene_3653]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8860]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14816]]
−
* [[Tiso_gene_829]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5529]]
−
* [[Tiso_gene_9234]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_4192]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_2929]]
+
* Gene: [[Tiso_gene_8859]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_1541]]
+
* Gene: [[Tiso_gene_14227]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6614]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_9234]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_17616]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_38]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_4437]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_2889]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_5529]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_4194]]
−
* [[Tiso_gene_12149]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_15043]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_14227]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_537]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_4026]]
−
* [[Tiso_gene_9243]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14646]]
−
* [[Tiso_gene_11098]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_195]]
−
* [[Tiso_gene_873]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_3653]]
−
* [[Tiso_gene_2452]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_1444]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_1291]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2447]]
+
* Gene: [[Tiso_gene_8949]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_15465]]
+
* Gene: [[Tiso_gene_17616]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_674]]
+
* Gene: [[Tiso_gene_546]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_13738]]
−
* [[Tiso_gene_2889]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_538]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_14239]]
+
* Gene: [[Tiso_gene_2449]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2448]]
+
* Gene: [[Tiso_gene_1959]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_14226]]
+
* Gene: [[Tiso_gene_7387]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_4436]]
+
* Gene: [[Tiso_gene_2447]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_4092]]
+
* Gene: [[Tiso_gene_20353]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_7745]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_5166]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_199]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_4596]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_2448]]
−
* [[Tiso_gene_250]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_20353]]
+
* Gene: [[Tiso_gene_5525]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_12148]]
−
* [[Tiso_gene_9004]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_20327]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_4726]]
+
* Gene: [[Tiso_gene_11012]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_3287]]
+
* Gene: [[Tiso_gene_2176]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_8950]]
+
* Gene: [[Tiso_gene_13325]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_1984]]
+
* Gene: [[Tiso_gene_13268]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_9959]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_12149]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_1611]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_2451]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_38]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_6614]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13681]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_2897]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_17751]]
+
* Gene: [[Tiso_gene_4436]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_623]]
−
* [[Tiso_gene_546]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_9926]]
−
* [[Tiso_gene_538]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8949]]
+
* Gene: [[Tiso_gene_6181]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2449]]
+
* Gene: [[Tiso_gene_16478]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_16478]]
+
* Gene: [[Tiso_gene_6180]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_11012]]
+
* Gene: [[Tiso_gene_1984]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_2452]]
−
* [[Tiso_gene_19098]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_15465]]
−
* [[Tiso_gene_14474]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_4092]]
−
* [[Tiso_gene_5166]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_7745]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_15043]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_829]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2176]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_250]]
−
* [[Tiso_gene_2068]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_1541]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_199]]
−
* [[Tiso_gene_8164]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_4192]]
+
* Gene: [[Tiso_gene_7123]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_4155]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_4026]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_10282]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13653]]
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_13325]]
+
* Gene: [[Tiso_gene_9114]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_19350]]
+
* Gene: [[Tiso_gene_2450]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8859]]
+
* Gene: [[Tiso_gene_14474]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2631]]
+
* Gene: [[Tiso_gene_8461]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8763]]
+
* Gene: [[Tiso_gene_4437]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6180]]
+
* Gene: [[Tiso_gene_4726]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_14646]]
+
* Gene: [[Tiso_gene_9659]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_1610]]
+
* Gene: [[Tiso_gene_8950]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_14816]]
+
* Gene: [[Tiso_gene_2068]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_537]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_195]]
+
* Gene: [[Tiso_gene_9243]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8601]]
+
* Gene: [[Tiso_gene_13264]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_2451]]
+
* Gene: [[Tiso_gene_4330]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_9659]]
+
* Gene: [[Tiso_gene_13681]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_9423]]
+
* Gene: [[Tiso_gene_1610]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_8584]]
+
* Gene: [[Tiso_gene_13653]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_20327]]
+
* Gene: [[Tiso_gene_17449]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_4330]]
+
* Gene: [[Tiso_gene_10221]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_17449]]
+
* Gene: [[Tiso_gene_19098]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_623]]
+
* Gene: [[Tiso_gene_4155]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_12148]]
+
* Gene: [[Tiso_gene_8164]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_572]]
+
* Gene: [[Tiso_gene_19350]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_6181]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_2631]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_9926]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_17751]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2450]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_1611]]
−
* [[Tiso_gene_10282]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_3287]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_7734]]
−
* [[Tiso_gene_1444]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_572]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_1291]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_9114]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_14239]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_4596]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_8860]]
−
* [[Tiso_gene_5525]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
+
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
Line 404: Line 405:
 
{{#set: common name=atp-dependent_proteaseatpasesubunit}}
 
{{#set: common name=atp-dependent_proteaseatpasesubunit}}
 
{{#set: ec number=EC-3.6.1.15}}
 
{{#set: ec number=EC-3.6.1.15}}
−
{{#set: gene associated=Tiso_gene_7734|Tiso_gene_4194|Tiso_gene_13738|Tiso_gene_1959|Tiso_gene_1960|Tiso_gene_2924|Tiso_gene_7123|Tiso_gene_10221|Tiso_gene_12899|Tiso_gene_13264|Tiso_gene_2897|Tiso_gene_7387|Tiso_gene_13268|Tiso_gene_8461|Tiso_gene_3653|Tiso_gene_8860|Tiso_gene_829|Tiso_gene_9234|Tiso_gene_2929|Tiso_gene_1541|Tiso_gene_6614|Tiso_gene_17616|Tiso_gene_4437|Tiso_gene_5529|Tiso_gene_12149|Tiso_gene_14227|Tiso_gene_9243|Tiso_gene_11098|Tiso_gene_873|Tiso_gene_2452|Tiso_gene_1291|Tiso_gene_2447|Tiso_gene_15465|Tiso_gene_674|Tiso_gene_2889|Tiso_gene_14239|Tiso_gene_2448|Tiso_gene_14226|Tiso_gene_4436|Tiso_gene_4092|Tiso_gene_7745|Tiso_gene_199|Tiso_gene_250|Tiso_gene_20353|Tiso_gene_9004|Tiso_gene_4726|Tiso_gene_3287|Tiso_gene_8950|Tiso_gene_1984|Tiso_gene_9959|Tiso_gene_1611|Tiso_gene_38|Tiso_gene_13681|Tiso_gene_17751|Tiso_gene_546|Tiso_gene_538|Tiso_gene_8949|Tiso_gene_2449|Tiso_gene_16478|Tiso_gene_11012|Tiso_gene_19098|Tiso_gene_14474|Tiso_gene_5166|Tiso_gene_15043|Tiso_gene_2176|Tiso_gene_2068|Tiso_gene_8164|Tiso_gene_4192|Tiso_gene_4155|Tiso_gene_4026|Tiso_gene_13653|Tiso_gene_13325|Tiso_gene_19350|Tiso_gene_8859|Tiso_gene_2631|Tiso_gene_8763|Tiso_gene_6180|Tiso_gene_14646|Tiso_gene_1610|Tiso_gene_14816|Tiso_gene_537|Tiso_gene_195|Tiso_gene_8601|Tiso_gene_2451|Tiso_gene_9659|Tiso_gene_9423|Tiso_gene_8584|Tiso_gene_20327|Tiso_gene_4330|Tiso_gene_17449|Tiso_gene_623|Tiso_gene_12148|Tiso_gene_572|Tiso_gene_6181|Tiso_gene_9926|Tiso_gene_2450|Tiso_gene_10282|Tiso_gene_1444|Tiso_gene_9114|Tiso_gene_4596|Tiso_gene_5525}}
+
{{#set: gene associated=Tiso_gene_1960|Tiso_gene_11098|Tiso_gene_12899|Tiso_gene_2924|Tiso_gene_14226|Tiso_gene_674|Tiso_gene_8601|Tiso_gene_8584|Tiso_gene_9959|Tiso_gene_2929|Tiso_gene_9423|Tiso_gene_873|Tiso_gene_8763|Tiso_gene_9004|Tiso_gene_14816|Tiso_gene_5529|Tiso_gene_4192|Tiso_gene_8859|Tiso_gene_14227|Tiso_gene_9234|Tiso_gene_38|Tiso_gene_2889|Tiso_gene_4194|Tiso_gene_15043|Tiso_gene_537|Tiso_gene_4026|Tiso_gene_14646|Tiso_gene_195|Tiso_gene_3653|Tiso_gene_1444|Tiso_gene_8949|Tiso_gene_17616|Tiso_gene_546|Tiso_gene_13738|Tiso_gene_538|Tiso_gene_2449|Tiso_gene_1959|Tiso_gene_7387|Tiso_gene_2447|Tiso_gene_20353|Tiso_gene_5166|Tiso_gene_4596|Tiso_gene_2448|Tiso_gene_5525|Tiso_gene_12148|Tiso_gene_20327|Tiso_gene_11012|Tiso_gene_2176|Tiso_gene_13325|Tiso_gene_13268|Tiso_gene_12149|Tiso_gene_2451|Tiso_gene_6614|Tiso_gene_2897|Tiso_gene_4436|Tiso_gene_623|Tiso_gene_9926|Tiso_gene_6181|Tiso_gene_16478|Tiso_gene_6180|Tiso_gene_1984|Tiso_gene_2452|Tiso_gene_15465|Tiso_gene_4092|Tiso_gene_7745|Tiso_gene_829|Tiso_gene_250|Tiso_gene_1541|Tiso_gene_199|Tiso_gene_7123|Tiso_gene_10282|Tiso_gene_9114|Tiso_gene_2450|Tiso_gene_14474|Tiso_gene_8461|Tiso_gene_4437|Tiso_gene_4726|Tiso_gene_9659|Tiso_gene_8950|Tiso_gene_2068|Tiso_gene_9243|Tiso_gene_13264|Tiso_gene_4330|Tiso_gene_13681|Tiso_gene_1610|Tiso_gene_13653|Tiso_gene_17449|Tiso_gene_10221|Tiso_gene_19098|Tiso_gene_4155|Tiso_gene_8164|Tiso_gene_19350|Tiso_gene_2631|Tiso_gene_17751|Tiso_gene_1611|Tiso_gene_3287|Tiso_gene_7734|Tiso_gene_572|Tiso_gene_1291|Tiso_gene_14239|Tiso_gene_8860}}
−
{{#set: in pathway=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
+
{{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:07, 21 March 2018

Reaction RXN-12195

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • helicase_mov-10-_-like
    • hsp104
    • ORF
    • 26s_proteaseregulatorysubunit6bhomolog
    • nfx1-type_zinc_finger-containing_protein_1
    • atp-dependent_metalloprotease
    • adenylate_kinase_domain-containing_protein_1
    • replication_factor_c_subunit_2
    • member_of_the_hsp104_clp_superfamily
    • replication_factor_c_subunit_5
    • at1g33290
    • replication_factor_c_subunit_3
    • sh2_domain_containing_protein
    • replication_control_protein_1_like
    • aaa_family_cdc48_subfamily
    • adenylate_guanylate
    • replication_factor_c_subunit_1
    • dna-binding_protein_smubp-2
    • e3_ubiquitin-protein_ligase_rnf213-like
    • atp-dependent_zinc_metalloprotease
    • cytosolic_fe-s_cluster_assembly_factor_nubp1_homolog
    • uncharacterized_transmembrane_protein_ddb_g0290641
    • isoform_m_of_dna_helicase_mcm9
    • atpase_family_aaa_domain-containing_protein_2b-_partial
    • trna-splicing_endonuclease_positive_effector
    • gtpase_der
    • uridine_kinase
    • fidgetin-like_protein1
    • origin_recognition_complex_subunit_4
    • atpase_aaa
    • atpase_afg2_protein
    • atpase_family_associated_with_various_cellular_activities
    • katanin_p60_atpase-containing_subunit_a-like_2
    • atp-dependent_proteaseatpasesubunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CTP[c] + 1 H2O[c] => 1 phosphate[c] + 1 H+[c] + 1 CDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





















Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12195&oldid=39660"