Difference between revisions of "RXN-16095"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** chloroplast_beta-keto_acyl_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
+
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[EPISTEROL]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-700]][c] '''+''' 2 [[WATER]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17346]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17347]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 episterol[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 ergosta-5,7,24(28)-trien-3β-ol[c] '''+''' 2 H2O[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5446]]
+
* Gene: [[Tiso_gene_9871]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
+
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
−
** '''10''' reactions found over '''36''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075]
+
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33463 33463]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.19.20}}
+
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
−
{{#set: gene associated=Tiso_gene_5446}}
+
{{#set: ec number=EC-1.1.1.330}}
−
{{#set: in pathway=PWY-2541|PWY-6075}}
+
{{#set: gene associated=Tiso_gene_9871}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=athaliana}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN-16095

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 H+[c] + 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] => 1 NADP+[c] + 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16095&oldid=43262"