Difference between revisions of "PWY-5661"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** aldo-ket...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** ORF
+
** GDP-glucose biosynthesis
−
** aldo-keto_reductase_family_4_member_c9_isoform_x2
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[AMMONIUM]][c]
+
* [[GLUCOKIN-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 H2O[c] '''+''' 1 adenosine[c] '''+''' 1 H+[c] '''=>''' 1 inosine[c] '''+''' 1 ammonium[c]
+
*** [[Tiso_gene_3107]]
−
 
+
*** [[Tiso_gene_1303]]
−
== Genes associated with this reaction  ==
+
** 4 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_18322]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-synechocystis]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_19373]]
+
* [[PHOSPHOGLUCMUT-RXN]]
−
** IN-SILICO_ANNOTATION
+
** 2 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_4816]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_13477]]
−
== Pathways  ==
+
** 3 reconstruction source(s) associated:
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
+
*** [[annotation-in-silico_annotation]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
*** [[manual-primary_network]]
−
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
+
*** [[annotation-experimental_annotation]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
== Reaction(s) not found ==
−
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.34-RXN 2.7.7.34-RXN]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
+
{{#set: taxonomic range=TAX-2}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
+
{{#set: common name=GDP-glucose biosynthesis}}
−
* UNIPROT:
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/P22333 P22333]
+
{{#set: total reaction=3}}
−
** [http://www.uniprot.org/uniprot/P00813 P00813]
+
{{#set: completion rate=67.0}}
−
** [http://www.uniprot.org/uniprot/P03958 P03958]
+
−
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
+
−
** [http://www.uniprot.org/uniprot/P55266 P55266]
+
−
** [http://www.uniprot.org/uniprot/P53984 P53984]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
+
−
{{#set: ec number=EC-3.5.4.4}}
+
−
{{#set: gene associated=Tiso_gene_18322|Tiso_gene_19373}}
+
−
{{#set: in pathway=PWY0-1296|PWY-6609|PWY-6611|SALVADEHYPOX-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:46, 21 March 2018

Pathway PWY-5661

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5661&oldid=43639"