Difference between revisions of "PWY-5754"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URA-PHOSPH-RXN URA-PHOSPH-RXN] == * direction: ** REVERSIBLE * common name: ** uridine_phosphorylas...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URA-PHOSPH-RXN URA-PHOSPH-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754] ==
* direction:
+
* taxonomic range:
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** uridine_phosphorylase
+
** 4-hydroxybenzoate biosynthesis I (eukaryotes)
* ec number:
+
** [http://enzyme.expasy.org/EC/2.4.2.3 EC-2.4.2.3]
+
** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** p-hydroxybenzoate biosynthesis I (eukaryotes)
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''6''' reactions in the full pathway
** 1 [[Pi]][c] '''+''' 1 [[DEOXYURIDINE]][c] '''<=>''' 1 [[URACIL]][c] '''+''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c]
+
* [[4-COUMARATE--COA-LIGASE-RXN]]
* With common name(s):
+
** 2 associated gene(s):
** 1 phosphate[c] '''+''' 1 2'-deoxyuridine[c] '''<=>''' 1 uracil[c] '''+''' 1 2-deoxy-&alpha;-D-ribose 1-phosphate[c]
+
*** [[Tiso_gene_12275]]
 
+
*** [[Tiso_gene_14183]]
== Genes associated with this reaction  ==
+
** 2 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-athaliana]]
* [[Tiso_gene_20384]]
+
*** [[orthology-esiliculosus]]
** IN-SILICO_ANNOTATION
+
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
***AUTOMATED-NAME-MATCH
+
** 3 associated gene(s):
== Pathways  ==
+
*** [[Tiso_gene_10680]]
* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7181 PWY-7181]
+
*** [[Tiso_gene_6815]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
*** [[Tiso_gene_17718]]
== Reconstruction information  ==
+
** 3 reconstruction source(s) associated:
* [[annotation]]:
+
*** [[manual-primary_network]]
** [[pathwaytools]]:
+
*** [[orthology-creinhardtii]]
*** [[in-silico_annotation]]
+
*** [[orthology-synechocystis]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.23-RXN 3.1.2.23-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1118 RXN3O-1118]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1120 RXN3O-1120]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22824 22824]
+
{{#set: common name=4-hydroxybenzoate biosynthesis I (eukaryotes)}}
* LIGAND-RXN:
+
{{#set: common name=p-hydroxybenzoate biosynthesis I (eukaryotes)}}
** [http://www.genome.jp/dbget-bin/www_bget?R02484 R02484]
+
{{#set: reaction found=2}}
{{#set: direction=REVERSIBLE}}
+
{{#set: total reaction=6}}
{{#set: common name=uridine_phosphorylase}}
+
{{#set: completion rate=33.0}}
{{#set: ec number=EC-2.4.2.3}}
+
{{#set: ec number=EC-2.4.2.2}}
+
{{#set: gene associated=Tiso_gene_20384}}
+
{{#set: in pathway=PWY-7181}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:48, 21 March 2018

Pathway PWY-5754

  • taxonomic range:
  • common name:
    • 4-hydroxybenzoate biosynthesis I (eukaryotes)
  • Synonym(s):
    • p-hydroxybenzoate biosynthesis I (eukaryotes)

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links