Difference between revisions of "PWY-7790"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.4.4-RXN 1.6.4.4-RXN] == * direction: ** REVERSIBLE * common name: ** nucleoredoxin ** ORF * ec...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.4.4-RXN 1.6.4.4-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** nucleoredoxin
+
** UMP biosynthesis II
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.8.1.8 EC-1.8.1.8]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** uridine-5'-phosphate biosynthesis II
 +
** de novo biosynthesis of uridine-5'-phosphate II
 +
** de novo biosynthesis of uridine-5'-monophosphate II
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''6''' reactions found over '''6''' reactions in the full pathway
−
** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[Protein-Dithiols]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[Protein-Disulfides]][c]
+
* [[ASPCARBTRANS-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 NAD(P)+[c] '''+''' 1 a protein dithiol[c] '''<=>''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 a protein disulfide[c]
+
*** [[Tiso_gene_13527]]
−
 
+
** 7 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_475]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-athaliana]]
−
***EC-NUMBER
+
*** [[orthology-synechocystis]]
−
* [[Tiso_gene_15704]]
+
*** [[manual-primary_network]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* [[CARBPSYN-RXN]]
−
== Pathways  ==
+
** 3 associated gene(s):
−
== Reconstruction information  ==
+
*** [[Tiso_gene_4976]]
−
* [[annotation]]:
+
*** [[Tiso_gene_4975]]
−
** [[pathwaytools]]:
+
*** [[Tiso_gene_4685]]
−
*** [[in-silico_annotation]]
+
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[DIHYDROOROT-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15379]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[OROPRIBTRANS-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_11163]]
 +
*** [[Tiso_gene_18647]]
 +
*** [[Tiso_gene_11164]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[OROTPDECARB-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_20050]]
 +
*** [[Tiso_gene_18647]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 +
* [[RXN-9929]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5280]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-synechocystis]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33682}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03913 R03913]
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03914 R03914]
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=UMP biosynthesis II}}
−
{{#set: common name=nucleoredoxin}}
+
{{#set: common name=uridine-5'-phosphate biosynthesis II|de novo biosynthesis of uridine-5'-phosphate II|de novo biosynthesis of uridine-5'-monophosphate II}}
−
{{#set: common name=ORF}}
+
{{#set: reaction found=6}}
−
{{#set: ec number=EC-1.8.1.8}}
+
{{#set: total reaction=6}}
−
{{#set: gene associated=Tiso_gene_475|Tiso_gene_15704}}
+
{{#set: completion rate=100.0}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:48, 21 March 2018

Pathway PWY-7790

  • taxonomic range:
  • common name:
    • UMP biosynthesis II
  • Synonym(s):
    • uridine-5'-phosphate biosynthesis II
    • de novo biosynthesis of uridine-5'-phosphate II
    • de novo biosynthesis of uridine-5'-monophosphate II

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7790&oldid=43868"