Difference between revisions of "PRACH"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN] == * direction: ** REVERSI...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRACH PRACH] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosyl-AMP cyclohydrolase,...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRACH PRACH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.2.1.28 EC-1.2.1.28]
+
** phosphoribosyl-AMP cyclohydrolase, cytosol
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BENZALDEHYDE]][c] '''<=>''' 1 [[BENZOATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1.0 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 benzaldehyde[c] '''<=>''' 1 benzoate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
+
** 1.0 1-(5-phospho-&beta;-D-ribosyl)-AMP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 1-(5-phospho-&beta;-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_11297]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6763]], salicortin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6763 PWY-6763]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1501]], mandelate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1501 PWY-1501]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6766]], salicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6766 PWY-6766]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[TOLUENE-DEG-CATECHOL-PWY]], toluene degradation to benzoate: [http://metacyc.org/META/NEW-IMAGE?object=TOLUENE-DEG-CATECHOL-PWY TOLUENE-DEG-CATECHOL-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6446]], benzoate biosynthesis III (CoA-dependent, non-&beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6446 PWY-6446]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-&beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01419 R01419]
+
{{#set: common name=phosphoribosyl-AMP cyclohydrolase, cytosol}}
−
* UNIPROT:
+
{{#set: gene associated=Tiso_gene_11297}}
−
** [http://www.uniprot.org/uniprot/P43503 P43503]
+
{{#set: in pathway=}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-1.2.1.28}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: in pathway=PWY-6763|PWY-1501|PWY-6766|TOLUENE-DEG-CATECHOL-PWY|PWY-6446|PWY-6444}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:48, 21 March 2018

Reaction PRACH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosyl-AMP cyclohydrolase, cytosol
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 1-(5-phospho-β-D-ribosyl)-AMP[c] + 1.0 H2O[c] => 1.0 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRACH&oldid=43915"