Difference between revisions of "RXN-13673"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1534 PWY0-1534] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glutathione_s-transf...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1534 PWY0-1534] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** hydrogen sulfide biosynthesis I
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** ORF
 +
** glutathione_s-transferase
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** phi_class_glutathione_s-transferase
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** glutathione_s-
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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** 1 [[CPD-10806]][c] '''+''' 1 [[GLUTATHIONE]][c] '''=>''' 1 [[CPD-14704]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''1''' reaction(s) not found
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** 1 4-hydroxy-2-nonenal[c] '''+''' 1 glutathione[c] '''=>''' 1 4-hydroxy-2-nonenal-glutathione conjugate[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6945 RXN0-6945]
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 +
== Genes associated with this reaction ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5129]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_19041]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8389]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2775]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_3233]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1104]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8508]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_6036]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19791]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8509]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_20110]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1534 PWY0-1534]
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=glutathione_s-transferase}}
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{{#set: common name=hydrogen sulfide biosynthesis I}}
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{{#set: common name=phi_class_glutathione_s-transferase}}
−
{{#set: reaction found=1}}
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{{#set: common name=glutathione_s-}}
−
{{#set: reaction not found=1}}
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{{#set: ec number=EC-2.5.1.18}}
 +
{{#set: gene associated=Tiso_gene_5129|Tiso_gene_19041|Tiso_gene_8389|Tiso_gene_2775|Tiso_gene_3233|Tiso_gene_1104|Tiso_gene_8508|Tiso_gene_6036|Tiso_gene_19791|Tiso_gene_8509|Tiso_gene_20110}}
 +
{{#set: in pathway=PWY-7112}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN-13673

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • glutathione_s-transferase
    • phi_class_glutathione_s-transferase
    • glutathione_s-
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-hydroxy-2-nonenal[c] + 1 glutathione[c] => 1 4-hydroxy-2-nonenal-glutathione conjugate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7112, 4-hydroxy-2-nonenal detoxification: PWY-7112
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13673&oldid=43986"