Difference between revisions of "Tiso gene 3527"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Gene == Gene Tiso_gene_3527 == * right end position: ** 6319 * transcription direction: ** POSITIVE * left end position: ** 5150 * centisome position: ** 31.20644...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] ==
+
== Gene Tiso_gene_3527 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 6319
−
* common name:
+
* transcription direction:
−
** nitrite_reductase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.7.7.1 EC-1.7.7.1]
+
** 5150
 +
* centisome position:
 +
** 31.206448   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PHOSGLYPHOS-RXN]]
−
** 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''+''' 1 [[NITRITE]][c] '''=>''' 2 [[WATER]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 1 [[AMMONIUM]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 8 H+[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 nitrite[c] '''=>''' 2 H2O[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 ammonium[c]
+
** Source: [[orthology-athaliana]]
−
 
+
** Source: [[orthology-athaliana]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-synechocystis]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_7919]]
+
** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
== Pathways associated ==
−
***EC-NUMBER
+
* [[PWY-1042]]
−
** EXPERIMENTAL_ANNOTATION
+
* [[PWY66-399]]
−
***EC-NUMBER
+
* [[GLUCONEO-PWY]]
−
** [[pantograph]]-[[athaliana]]
+
* [[SUCSYN-PWY]]
−
** [[pantograph]]-[[athaliana]]
+
* [[PWY-6901]]
−
** [[pantograph]]-[[synechocystis]]
+
* [[P124-PWY]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[GLYCOLYSIS]]
−
== Pathways ==
+
* [[PWY-6886]]
−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
+
* [[CALVIN-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[ANAGLYCOLYSIS-PWY]]
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
+
* [[P122-PWY]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[P185-PWY]]
−
== Reconstruction information  ==
+
* [[PWY-5484]]
−
* [[orthology]]:
+
* [[PWY-7003]]
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=6319}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00790 R00790]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=5150}}
−
{{#set: common name=nitrite_reductase}}
+
{{#set: centisome position=31.206448    }}
−
{{#set: ec number=EC-1.7.7.1}}
+
{{#set: reaction associated=PHOSGLYPHOS-RXN}}
−
{{#set: gene associated=Tiso_gene_7919}}
+
{{#set: pathway associated=PWY-1042|PWY66-399|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|P122-PWY|P185-PWY|PWY-5484|PWY-7003}}
−
{{#set: in pathway=PWY-381|PWY490-3}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:50, 21 March 2018

Gene Tiso_gene_3527

  • right end position:
    • 6319
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5150
  • centisome position:
    • 31.206448
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3527&oldid=44075"