Difference between revisions of "5-NUCLEOTID-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_12634 == * left end position: ** 3993 * transcription direction: ** NEGATIVE * right end position: ** 6725 * centisome position: ** 58.6343...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_-nucleotidase...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** 5_-nucleotidase |
− | * | + | ** 5_deoxy_cytosolic_type_c_protein |
− | ** | + | ** probable_cytosolic_imp-gmp_specific_5_-nucleotidase |
− | * | + | ** ORF |
− | ** | + | * ec number: |
+ | ** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** in-silico_annotation | + | ** 1 [[WATER]][c] '''+''' 1 [[Ribonucleoside-Monophosphates]][c] '''=>''' 1 [[Ribonucleosides]][c] '''+''' 1 [[Pi]][c] |
− | *** | + | * With common name(s): |
− | ** | + | ** 1 H2O[c] '''+''' 1 a ribonucleoside 5'-monophosphate[c] '''=>''' 1 a ribonucleoside[c] '''+''' 1 phosphate[c] |
− | *** | + | |
− | ** [[ | + | == Genes associated with this reaction == |
− | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
− | * [[ | + | * Gene: [[Tiso_gene_13929]] |
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_5911]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[Tiso_gene_14434]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_6640]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_14435]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_6988]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_14246]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | == Pathways == | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07297 R07297] |
− | {{#set: | + | * UNIPROT: |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P06196 P06196] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P21588 P21588] |
− | {{#set: pathway | + | ** [http://www.uniprot.org/uniprot/O34313 O34313] |
+ | ** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44] | ||
+ | ** [http://www.uniprot.org/uniprot/O29385 O29385] | ||
+ | ** [http://www.uniprot.org/uniprot/P44569 P44569] | ||
+ | ** [http://www.uniprot.org/uniprot/O83142 O83142] | ||
+ | ** [http://www.uniprot.org/uniprot/P49902 P49902] | ||
+ | ** [http://www.uniprot.org/uniprot/P22848 P22848] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05927 Q05927] | ||
+ | ** [http://www.uniprot.org/uniprot/P21589 P21589] | ||
+ | ** [http://www.uniprot.org/uniprot/P29240 P29240] | ||
+ | ** [http://www.uniprot.org/uniprot/P07024 P07024] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=5_-nucleotidase}} | ||
+ | {{#set: common name=5_deoxy_cytosolic_type_c_protein}} | ||
+ | {{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: ec number=EC-3.1.3.5}} | ||
+ | {{#set: gene associated=Tiso_gene_13929|Tiso_gene_5911|Tiso_gene_14434|Tiso_gene_6640|Tiso_gene_14435|Tiso_gene_6988|Tiso_gene_14246}} | ||
+ | {{#set: in pathway=}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 19:50, 21 March 2018
Contents
Reaction 5-NUCLEOTID-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- 5_-nucleotidase
- 5_deoxy_cytosolic_type_c_protein
- probable_cytosolic_imp-gmp_specific_5_-nucleotidase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 Ribonucleoside-Monophosphates[c] => 1 Ribonucleosides[c] + 1 Pi[c]
- With common name(s):
- 1 H2O[c] + 1 a ribonucleoside 5'-monophosphate[c] => 1 a ribonucleoside[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_13929
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5911
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14434
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6640
- Source: orthology-esiliculosus
- Gene: Tiso_gene_14435
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6988
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14246
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
- UNIPROT: