Difference between revisions of "Tiso gene 14239"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1623 RXN-1623] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acylglycerol-3-phosphate_o-...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14239 == * right end position: ** 3226 * transcription direction: ** POSITIVE * left end position: ** 13 * centisome position: ** 0.2258512...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1623 RXN-1623] ==
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== Gene Tiso_gene_14239 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3226
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* common name:
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* transcription direction:
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** 1-acylglycerol-3-phosphate_o-acyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
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** 13
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* centisome position:
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** 0.22585128   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[CO-A]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a long-chain acyl-CoA[c] '''+''' 1 a 1-acyl-sn-glycerol 3-phosphate[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 coenzyme A[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_13959]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN0-5462]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
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*** Assignment: ec-number
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Pathways associated ==
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* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
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* [[PWY-7184]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7198]]
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== Reconstruction information  ==
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* [[PWY-6545]]
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* [[orthology]]:
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* [[PWY-7210]]
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3226}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19709 19709]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=13}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02241 R02241]
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{{#set: centisome position=0.22585128    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=1-acylglycerol-3-phosphate_o-acyltransferase}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: ec number=EC-2.3.1.51}}
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{{#set: gene associated=Tiso_gene_13959}}
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{{#set: in pathway=PWY-5667|TRIGLSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_14239

  • right end position:
    • 3226
  • transcription direction:
    • POSITIVE
  • left end position:
    • 13
  • centisome position:
    • 0.22585128
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14239&oldid=39749"