Difference between revisions of "Tiso gene 7329"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.4.4...")
 
(Created page with "Category:Gene == Gene Tiso_gene_7329 == * right end position: ** 8048 * transcription direction: ** NEGATIVE * left end position: ** 5328 * centisome position: ** 47.20056...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] ==
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== Gene Tiso_gene_7329 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 8048
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.4.4.2 EC-1.4.4.2]
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** NEGATIVE
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* left end position:
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** 5328
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* centisome position:
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** 47.200565   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLY]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 glycine[c] '''<=>''' 1 CO2[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7315]]
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* [[Tiso_gene_17287]]
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* [[PWY-7316]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7301]]
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* [[Tiso_gene_428]]
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* [[PWY-7657]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7312]]
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== Pathways  ==
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* [[PWY-7318]]
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* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-SYN2-PWY GLYCINE-SYN2-PWY]
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* [[PWY-6942]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7104]]
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* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
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* [[PWY-7814]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7440]]
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== Reconstruction information  ==
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* [[DTDPRHAMSYN-PWY]]
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* [[orthology]]:
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* [[PWY-6953]]
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** [[pantograph]]:
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* [[PWY-6808]]
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*** [[esiliculosus]]
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* [[PWY-7413]]
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* [[manual]]:
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* [[PWY-6976]]
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** [[primary_network]]
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* [[PWY-7688]]
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* [[PWY-6974]]
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* [[PWY-6973]]
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* [[PWY-3221]]
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* [[PWY-7414]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=8048}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=5328}}
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** [http://www.uniprot.org/uniprot/P26969 P26969]
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{{#set: centisome position=47.200565    }}
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** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
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{{#set: reaction associated=DTDPGLUCDEHYDRAT-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
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{{#set: pathway associated=PWY-7315|PWY-7316|PWY-7301|PWY-7657|PWY-7312|PWY-7318|PWY-6942|PWY-7104|PWY-7814|PWY-7440|DTDPRHAMSYN-PWY|PWY-6953|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
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** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
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** [http://www.uniprot.org/uniprot/P23378 P23378]
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** [http://www.uniprot.org/uniprot/P33195 P33195]
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** [http://www.uniprot.org/uniprot/O80988 O80988]
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** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
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** [http://www.uniprot.org/uniprot/O32915 O32915]
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** [http://www.uniprot.org/uniprot/O22575 O22575]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.4.4.2}}
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{{#set: gene associated=Tiso_gene_17287|Tiso_gene_428}}
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{{#set: in pathway=GLYCINE-SYN2-PWY|GLYCLEAV-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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Latest revision as of 19:51, 21 March 2018

Gene Tiso_gene_7329

  • right end position:
    • 8048
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5328
  • centisome position:
    • 47.200565
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7329&oldid=44237"