Difference between revisions of "RXN-9310"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_18264 == * left end position: ** 197 * transcription direction: ** POSITIVE * right end position: ** 2497 * centisome position: ** 6.287903...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_chloroplastic * ec nu...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** protein_chloroplastic |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.2.99.20 EC-4.2.99.20] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** | + | ** 1 [[CPD-9924]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CPD-9923]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''=>''' 1 pyruvate[c] '''+''' 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | * [[ | + | * Gene: [[Tiso_gene_1922]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * | + | == Pathways == |
| − | * [[PWY- | + | * [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837] |
| − | + | ** '''4''' reactions found over '''7''' reactions in the full pathway | |
| − | + | == Reconstruction information == | |
| − | * | + | * Category: [[annotation]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Tool: [[pathwaytools]] |
| − | * [[ | + | |
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25597 25597] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R08166 R08166] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=protein_chloroplastic}} |
| + | {{#set: ec number=EC-4.2.99.20}} | ||
| + | {{#set: gene associated=Tiso_gene_1922}} | ||
| + | {{#set: in pathway=PWY-5837}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:08, 21 March 2018
Contents
Reaction RXN-9310
- direction:
- LEFT-TO-RIGHT
- common name:
- protein_chloroplastic
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] => 1 pyruvate[c] + 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1922
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
