Difference between revisions of "Tiso gene 12828"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1101 RXN-1101] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Gene == Gene Tiso_gene_12828 == * right end position: ** 6166 * transcription direction: ** POSITIVE * left end position: ** 5844 * centisome position: ** 87.1718...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1101 RXN-1101] ==
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== Gene Tiso_gene_12828 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6166
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.44 EC-1.2.1.44]
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** POSITIVE
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* left end position:
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** 5844
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* centisome position:
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** 87.171844   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[COUMARALDEHYDE]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 4-coumaroyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 4-coumaraldehyde[c] '''+''' 1 NADP+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-8443]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_9504]]
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* [[PWY-5381]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15272]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11016]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=6166}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01615 R01615]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5844}}
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{{#set: ec number=EC-1.2.1.44}}
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{{#set: centisome position=87.171844    }}
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{{#set: gene associated=Tiso_gene_9504|Tiso_gene_15272|Tiso_gene_11016}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN|RXN-8443}}
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{{#set: in pathway=PWY-361}}
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{{#set: pathway associated=PWY-5381}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_12828

  • right end position:
    • 6166
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5844
  • centisome position:
    • 87.171844
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12828&oldid=39771"