Difference between revisions of "L-RIBULOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-RIBULOSE L-RIBULOSE] == * smiles: ** C(O)C(O)C(O)C(=O)CO * common name: ** L-ribulose * inchi...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-RIBULOSE L-RIBULOSE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C(O)C(O)C(=O)CO
 
* common name:
 
* common name:
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** tryptophan--trna_ligase
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** L-ribulose
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** tryptophan--trna_cytoplasmic
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* inchi key:
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* ec number:
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** InChIKey=ZAQJHHRNXZUBTE-UCORVYFPSA-N
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** [http://enzyme.expasy.org/EC/6.1.1.2 EC-6.1.1.2]
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* molecular weight:
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** 150.131   
 
* Synonym(s):
 
* Synonym(s):
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** ribulose
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-5116]]
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** 1 [[ATP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 a tRNAtrp[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-tryptophanyl-[tRNAtrp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14318]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14319]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12988]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 488-84-6
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24080 24080]
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* CAS : 2042-27-5
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=644111 644111]
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* UNIPROT:
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* HMDB : HMDB03371
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** [http://www.uniprot.org/uniprot/P23381 P23381]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
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** [http://www.genome.jp/dbget-bin/www_bget?C00508 C00508]
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** [http://www.uniprot.org/uniprot/O84589 O84589]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
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** [http://www.chemspider.com/Chemical-Structure.559151.html 559151]
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** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P43835 P43835]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16880 16880]
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** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
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* BIGG : rbl__L
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** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
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{{#set: smiles=C(O)C(O)C(O)C(=O)CO}}
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** [http://www.uniprot.org/uniprot/O26352 O26352]
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{{#set: common name=L-ribulose}}
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** [http://www.uniprot.org/uniprot/O51038 O51038]
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{{#set: inchi key=InChIKey=ZAQJHHRNXZUBTE-UCORVYFPSA-N}}
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** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
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{{#set: molecular weight=150.131    }}
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** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
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{{#set: common name=ribulose}}
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** [http://www.uniprot.org/uniprot/Q58810 Q58810]
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{{#set: consumed by=RXN0-5116}}
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** [http://www.uniprot.org/uniprot/O83640 O83640]
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** [http://www.uniprot.org/uniprot/P67590 P67590]
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** [http://www.uniprot.org/uniprot/O67115 O67115]
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** [http://www.uniprot.org/uniprot/P47372 P47372]
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** [http://www.uniprot.org/uniprot/P32921 P32921]
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** [http://www.uniprot.org/uniprot/Q12109 Q12109]
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** [http://www.uniprot.org/uniprot/Q49901 Q49901]
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** [http://www.uniprot.org/uniprot/P75510 P75510]
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** [http://www.uniprot.org/uniprot/O42875 O42875]
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** [http://www.uniprot.org/uniprot/O96771 O96771]
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** [http://www.uniprot.org/uniprot/P17248 P17248]
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** [http://www.uniprot.org/uniprot/P21656 P21656]
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** [http://www.uniprot.org/uniprot/P04803 P04803]
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** [http://www.uniprot.org/uniprot/P00954 P00954]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tryptophan--trna_ligase}}
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{{#set: common name=tryptophan--trna_cytoplasmic}}
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{{#set: ec number=EC-6.1.1.2}}
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{{#set: gene associated=Tiso_gene_14318|Tiso_gene_14319|Tiso_gene_12988}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:53, 21 March 2018

Metabolite L-RIBULOSE

  • smiles:
    • C(O)C(O)C(O)C(=O)CO
  • common name:
    • L-ribulose
  • inchi key:
    • InChIKey=ZAQJHHRNXZUBTE-UCORVYFPSA-N
  • molecular weight:
    • 150.131
  • Synonym(s):
    • ribulose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 488-84-6
  • CAS : 2042-27-5
  • PUBCHEM:
  • HMDB : HMDB03371
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : rbl__L




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