Difference between revisions of "RXN-4209"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_17192 == * left end position: ** 1000 * transcription direction: ** NEGATIVE * right end position: ** 3194 * centisome position: ** 25.9201...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_17192 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] ==
* left end position:
+
* direction:
** 1000
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
* right end position:
+
** 3194
+
* centisome position:
+
** 25.920164   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[PYRIMSYN3-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD-4125]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-4126]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
***automated-name-match
+
* With common name(s):
== Pathways associated ==
+
** 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''+''' 1 avenasterol[c] '''+''' 1 oxygen[c] '''=>''' 1 5-dehydroavenasterol[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 2 H2O[c]
* [[PWY-6910]]
+
 
* [[PWY-7282]]
+
== Genes associated with this reaction  ==
* [[PWY-7356]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[PWY-6890]]
+
* Gene: [[Tiso_gene_5446]]
* [[PWY-7357]]
+
** Source: [[orthology-athaliana]]
 +
== Pathways  ==
 +
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
 +
** '''10''' reactions found over '''36''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=1000}}
+
* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07486 R07486]
{{#set: right end position=3194}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=25.920164    }}
+
{{#set: ec number=EC-1.14.19.20}}
{{#set: reaction associated=PYRIMSYN3-RXN}}
+
{{#set: gene associated=Tiso_gene_5446}}
{{#set: pathway associated=PWY-6910|PWY-7282|PWY-7356|PWY-6890|PWY-7357}}
+
{{#set: in pathway=PWY-2541}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN-4209

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway

Reconstruction information

External links