Difference between revisions of "RXN-16648"

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(Created page with "Category:Gene == Gene Tiso_gene_6563 == * left end position: ** 2548 * transcription direction: ** POSITIVE * right end position: ** 3640 * centisome position: ** 21.14347...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16648 RXN-16648] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_6563 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16648 RXN-16648] ==
* left end position:
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* direction:
** 2548
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.4.1.336 EC-2.4.1.336]
* right end position:
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** 3640
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* centisome position:
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** 21.143475   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[1.2.1.31-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-12575]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[D-Glucosyl-12-diacyl-glycerols]][c]
***ec-number
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* With common name(s):
* [[ALCOHOL-DEHYDROG-GENERIC-RXN]]
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** 1 UDP-α-D-glucose[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-glucopyranosyl)-sn-glycerol[c]
** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
* [[ALCOHOL-DEHYDROG-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* Gene: [[Tiso_gene_6390]]
***ec-number
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** Source: [[orthology-synechocystis]]
* [[ALLYSINE-DEHYDROG-RXN]]
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* Gene: [[Tiso_gene_322]]
** in-silico_annotation
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** Source: [[orthology-synechocystis]]
***ec-number
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== Pathways  ==
* [[L-IDITOL-2-DEHYDROGENASE-RXN]]
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
** in-silico_annotation
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** '''7''' reactions found over '''16''' reactions in the full pathway
***ec-number
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* [[PWY-7666]], galactolipid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7666 PWY-7666]
* [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
** in-silico_annotation
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== Reconstruction information  ==
***ec-number
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* Category: [[orthology]]
* [[RXN-10781]]
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** Source: [[orthology-synechocystis]]
** in-silico_annotation
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*** Tool: [[pantograph]]
***ec-number
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* [[RXN-10855]]
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** in-silico_annotation
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***ec-number
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* [[RXN-10911]]
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** in-silico_annotation
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***ec-number
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* [[RXN-10915]]
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** in-silico_annotation
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***ec-number
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* [[RXN-12448]]
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** in-silico_annotation
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***ec-number
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* [[RXN-12560]]
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** in-silico_annotation
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***ec-number
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* [[RXN-13198]]
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** in-silico_annotation
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***ec-number
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* [[RXN-13279]]
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** in-silico_annotation
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***ec-number
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* [[RXN-5424]]
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** in-silico_annotation
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***ec-number
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* [[RXN-5901]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7644]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7657]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7693]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7694]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7700]]
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** in-silico_annotation
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***ec-number
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* [[RXN-7706]]
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** in-silico_annotation
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***ec-number
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* [[RXN-8162]]
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** in-silico_annotation
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***ec-number
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* [[RXN3O-4113]]
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** in-silico_annotation
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***ec-number
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* [[RXN66-478]]
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** in-silico_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY66-21]]
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* [[PWY-7111]]
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* [[PWY-6587]]
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* [[PWY-5676]]
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* [[PWY-5082]]
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* [[PWY-7118]]
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* [[PWY-7013]]
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* [[PWY-3162]]
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* [[PWY-5751]]
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* [[PWY-6342]]
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* [[PWY1-3]]
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* [[PWY-5283]]
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* [[P161-PWY]]
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* [[ETOH-ACETYLCOA-ANA-PWY]]
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* [[FERMENTATION-PWY]]
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* [[PWY-6871]]
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* [[PWY-7396]]
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* [[PWY-5057]]
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* [[PWY-5741]]
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* [[PWY-5076]]
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* [[PWY-6333]]
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* [[PWY-5486]]
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* [[PWY-5079]]
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* [[PWY-5078]]
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* [[PWY-6313]]
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* [[PWY66-425]]
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* [[PWY-5480]]
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* [[PWY-5298]]
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* [[PWY3O-4108]]
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* [[PWY-7216]]
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* [[PWY-6802]]
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* [[LYSINE-DEG1-PWY]]
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* [[P122-PWY]]
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* [[PWY66-389]]
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* [[PWY4LZ-257]]
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* [[PWY-4101]]
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== External links  ==
 
== External links  ==
{{#set: left end position=2548}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.4.1.336}}
{{#set: right end position=3640}}
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{{#set: gene associated=Tiso_gene_6390|Tiso_gene_322}}
{{#set: centisome position=21.143475    }}
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{{#set: in pathway=PWY-7817|PWY-7666}}
{{#set: reaction associated=1.2.1.31-RXN|ALCOHOL-DEHYDROG-GENERIC-RXN|ALCOHOL-DEHYDROG-RXN|ALLYSINE-DEHYDROG-RXN|L-IDITOL-2-DEHYDROGENASE-RXN|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|RXN-10781|RXN-10855|RXN-10911|RXN-10915|RXN-12448|RXN-12560|RXN-13198|RXN-13279|RXN-5424|RXN-5901|RXN-7644|RXN-7657|RXN-7693|RXN-7694|RXN-7700|RXN-7706|RXN-8162|RXN3O-4113|RXN66-478}}
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{{#set: reconstruction category=orthology}}
{{#set: pathway associated=PWY66-21|PWY-7111|PWY-6587|PWY-5676|PWY-5082|PWY-7118|PWY-7013|PWY-3162|PWY-5751|PWY-6342|PWY1-3|PWY-5283|P161-PWY|ETOH-ACETYLCOA-ANA-PWY|FERMENTATION-PWY|PWY-6871|PWY-7396|PWY-5057|PWY-5741|PWY-5076|PWY-6333|PWY-5486|PWY-5079|PWY-5078|PWY-6313|PWY66-425|PWY-5480|PWY-5298|PWY3O-4108|PWY-7216|PWY-6802|LYSINE-DEG1-PWY|P122-PWY|PWY66-389|PWY4LZ-257|PWY-4101}}
+
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN-16648

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-7666, galactolipid biosynthesis II: PWY-7666
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links