Difference between revisions of "RXN0-5114"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-171 CPD-171] == * common name: ** a dolichyl β-D-mannosyl phosphate * Synonym(s): ** d...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoserine_chloroplastic...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-171 CPD-171] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a dolichyl β-D-mannosyl phosphate
+
** phosphoserine_chloroplastic
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
 
* Synonym(s):
 
* Synonym(s):
−
** dolichol monophosphate mannose
 
−
** β-D-mannopyranose, 1-ester with dolichol dihydrogen phosphate
 
−
** D-mannose, ester with dolichol dihydrogen phosphate
 
−
** mannosyl phosphoryl dolichol
 
−
** mannolipid
 
−
** dolichyl mannosyl phosphate
 
−
** dolichyl mannopyranosyl phosphate
 
−
** dolichyl phosphate D-mannose
 
−
** dolichyl D-mannosyl phosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-5466]]
+
* With identifiers:
−
* [[RXN-5467]]
+
** 1 [[WATER]][c] '''+''' 1 [[3-P-SERINE]][c] '''=>''' 1 [[SER]][c] '''+''' 1 [[Pi]][c]
−
* [[RXN-5468]]
+
* With common name(s):
−
* [[RXN-5469]]
+
** 1 H2O[c] '''+''' 1 3-phospho-L-serine[c] '''=>''' 1 L-serine[c] '''+''' 1 phosphate[c]
−
* [[RXN-16594]]
+
 
−
== Reaction(s) known to produce the compound ==
+
== Genes associated with this reaction  ==
−
* [[RXN-16594]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[2.4.1.83-RXN]]
+
* Gene: [[Tiso_gene_6236]]
−
== Reaction(s) of unknown directionality ==
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_16271]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways  ==
 +
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a dolichyl β-D-mannosyl phosphate}}
+
* RHEA:
−
{{#set: common name=dolichol monophosphate mannose|β-D-mannopyranose, 1-ester with dolichol dihydrogen phosphate|D-mannose, ester with dolichol dihydrogen phosphate|mannosyl phosphoryl dolichol|mannolipid|dolichyl mannosyl phosphate|dolichyl mannopyranosyl phosphate|dolichyl phosphate D-mannose|dolichyl D-mannosyl phosphate}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
−
{{#set: consumed by=RXN-5466|RXN-5467|RXN-5468|RXN-5469|RXN-16594}}
+
* LIGAND-RXN:
−
{{#set: produced by=RXN-16594|2.4.1.83-RXN}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=phosphoserine_chloroplastic}}
 +
{{#set: ec number=EC-3.1.3.3}}
 +
{{#set: gene associated=Tiso_gene_6236|Tiso_gene_16271}}
 +
{{#set: in pathway=SERSYN-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN0-5114

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoserine_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 3-phospho-L-serine[c] => 1 L-serine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-5114&oldid=44449"