Difference between revisions of "Tiso gene 4788"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLXG oligosaccha...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4788 == * right end position: ** 2666 * transcription direction: ** POSITIVE * left end position: ** 71 * centisome position: ** 0.49657294...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] ==
+
== Gene Tiso_gene_4788 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2666
−
* common name:
+
* transcription direction:
−
** xyloglucan XLXG oligosaccharide β-galactosidase
+
** POSITIVE
−
** glycoside_hydrolase
+
* left end position:
−
** polyprotein
+
** 71
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
+
** 0.49657294   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.2.1.113-RXN]]
−
** 1 [[CPD-13377]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 XLXG xyloglucan oligosaccharide[c] '''+''' 1 H2O[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 1 D-galactopyranose[c]
+
** Source: [[orthology-esiliculosus]]
−
 
+
== Pathways associated ==
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_17558]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1398]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=2666}}
−
{{#set: common name=xyloglucan XLXG oligosaccharide β-galactosidase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=glycoside_hydrolase}}
+
{{#set: left end position=71}}
−
{{#set: common name=polyprotein}}
+
{{#set: centisome position=0.49657294    }}
−
{{#set: ec number=EC-3.2.1.23}}
+
{{#set: reaction associated=3.2.1.113-RXN}}
−
{{#set: gene associated=Tiso_gene_17558|Tiso_gene_12839|Tiso_gene_1398}}
+
−
{{#set: in pathway=PWY-6807}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:53, 21 March 2018

Gene Tiso_gene_4788

  • right end position:
    • 2666
  • transcription direction:
    • POSITIVE
  • left end position:
    • 71
  • centisome position:
    • 0.49657294
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4788&oldid=44450"