Difference between revisions of "PMPOXI-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14408 RXN-14408] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** pyridoxamine_5_-phosphate_oxidase-related_fmn-binding | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 pyridoxamine 5'-phosphate[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_1471]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1] | ||
| + | ** [http://www.uniprot.org/uniprot/P44909 P44909] | ||
| + | ** [http://www.uniprot.org/uniprot/P38075 P38075] | ||
| + | ** [http://www.uniprot.org/uniprot/P74211 P74211] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=pyridoxamine_5_-phosphate_oxidase-related_fmn-binding}} |
| − | {{#set: in pathway=}} | + | {{#set: ec number=EC-1.4.3.5}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: gene associated=Tiso_gene_1471}} |
| − | {{#set: reconstruction | + | {{#set: in pathway=PWY-7204|PLPSAL-PWY}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:54, 21 March 2018
Contents
Reaction PMPOXI-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PYRIDOXAMINE-5P[c] + 1 WATER[c] + 1 OXYGEN-MOLECULE[c] => 1 HYDROGEN-PEROXIDE[c] + 1 PYRIDOXAL_PHOSPHATE[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 pyridoxamine 5'-phosphate[c] + 1 H2O[c] + 1 oxygen[c] => 1 hydrogen peroxide[c] + 1 pyridoxal 5'-phosphate[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1471
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
- 8 reactions found over 9 reactions in the full pathway
- PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
