Difference between revisions of "RXN-7828"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** amidase * ec number: ** [http...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** amidase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
+
** [http://enzyme.expasy.org/EC/2.4.1 EC-2.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-237]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 indole-3-acetamide[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
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** 1 UDP-α-D-glucose[c] '''+''' 1 pelargonidin-3-O-β-D-glucoside[c] '''=>''' 1 pelargonidin-3,5-di-O-β-D-glucoside[c] '''+''' 1 UDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13682]]
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* Gene: [[Tiso_gene_3452]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-athaliana]]
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***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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* [[PWY-5268]], salvianin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268]
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
+
* [[PWY-5139]], pelargonidin conjugates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=amidase}}
+
{{#set: ec number=EC-2.4.1}}
−
{{#set: ec number=EC-3.5.1.4}}
+
{{#set: gene associated=Tiso_gene_3452}}
−
{{#set: gene associated=Tiso_gene_13682}}
+
{{#set: in pathway=PWY-5268|PWY-5139}}
−
{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-athaliana}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:54, 21 March 2018

Reaction RXN-7828

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5268, salvianin biosynthesis: PWY-5268
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139, pelargonidin conjugates biosynthesis: PWY-5139
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7828&oldid=44514"