Difference between revisions of "RXN-8654"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17862 RXN-17862] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17862 RXN-17862] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.3.1.bu EC-2.3.1.bu]
+
** lipoate-protein_ligase_a
 +
** lipoate-protein_ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-terminal-glycine]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[N-terminal-N-Ac-glycine]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal glycyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 an N-terminal Nα-acetyl-glycyl-[protein][c]
+
** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 lipoyl-adenylate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4493]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4494]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17215]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_8713]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17216]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.bu}}
+
{{#set: common name=lipoate-protein_ligase_a}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: common name=lipoate-protein_ligase}}
 +
{{#set: gene associated=Tiso_gene_4493|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_17216}}
 +
{{#set: in pathway=PWY-6984|PWY0-522}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:55, 21 March 2018

Reaction RXN-8654

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H+[c] + 1 (R)-lipoate[c] => 1 lipoyl-adenylate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8654&oldid=44609"