Difference between revisions of "GLYOXII-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacylglutathione_...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** hydroxyacylglutathione_hydrolase
−
** ORF
+
** hydroxyacyl_glutathione_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/3.1.2.6 EC-3.1.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[ISOBUTANOL]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7000]][c]
+
** 1 [[S-LACTOYL-GLUTATHIONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[D-LACTATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 isobutanol[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 isobutanal[c]
+
** 1 (R)-S-lactoylglutathione[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 glutathione[c] '''+''' 1 (R)-lactate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5425]]
+
* Gene: [[Tiso_gene_10895]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_5424]]
+
** Source: [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_6563]]
+
* Gene: [[Tiso_gene_5281]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_7649]]
+
* Gene: [[Tiso_gene_19886]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_6562]]
+
* Gene: [[Tiso_gene_12304]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_10894]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
+
* [[PWY-5386]], methylglyoxal degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
+
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=polyketide_synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25245 25245]
−
{{#set: common name=ORF}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-1.1.1.1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01736 R01736]
−
{{#set: gene associated=Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_6562}}
+
* UNIPROT:
−
{{#set: in pathway=PWY-7396|PWY-7111|PWY-5057}}
+
** [http://www.uniprot.org/uniprot/Q9UZT9 Q9UZT9]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P0AC84 P0AC84]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9JWC6 Q9JWC6]
−
{{#set: reconstruction source=in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/O35952 O35952]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=hydroxyacylglutathione_hydrolase}}
 +
{{#set: common name=hydroxyacyl_glutathione_hydrolase}}
 +
{{#set: ec number=EC-3.1.2.6}}
 +
{{#set: gene associated=Tiso_gene_10895|Tiso_gene_5281|Tiso_gene_19886|Tiso_gene_12304|Tiso_gene_10894}}
 +
{{#set: in pathway=PWY-5386}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:55, 21 March 2018

Reaction GLYOXII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacylglutathione_hydrolase
    • hydroxyacyl_glutathione_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5386, methylglyoxal degradation I: PWY-5386
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYOXII-RXN&oldid=44655"