Difference between revisions of "RXN-10039"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1G-1346 CPD1G-1346] == * smiles: ** CCCCCCCCCCCCCCCCCCCCCCCCCCC(C(OCC1(OC(C(C(C1O)O)O)OC2(C(...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | * ec number: | |
| − | + | ** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2] | |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | = | + | * With identifiers: |
| − | * [[ | + | ** 1 [[SEPO3]][c] '''+''' 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[Charged-SEC-tRNAs]][c] |
| − | == | + | * With common name(s): |
| + | ** 1 selenophosphate[c] '''+''' 1 an O-phospho-L-seryl-[tRNASec][c] '''+''' 1 H2O[c] '''=>''' 2 phosphate[c] '''+''' 1 an L-selenocysteinyl-[tRNAsec][c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_16385]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | * | + | * LIGAND-RXN: |
| − | ** [http:// | + | ** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-2.9.1.2}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_16385}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6281}} |
| − | {{#set: | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:55, 21 March 2018
Contents
Reaction RXN-10039
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 SEPO3[c] + 1 O-phospho-L-seryl-tRNASecs[c] + 1 WATER[c] => 2 Pi[c] + 1 Charged-SEC-tRNAs[c]
- With common name(s):
- 1 selenophosphate[c] + 1 an O-phospho-L-seryl-[tRNASec][c] + 1 H2O[c] => 2 phosphate[c] + 1 an L-selenocysteinyl-[tRNAsec][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_16385
- Source: orthology-esiliculosus
Pathways
- PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
