Difference between revisions of "Tiso gene 15547"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN] == * direction: ** LEFT-TO-R...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15547 == * right end position: ** 4534 * transcription direction: ** POSITIVE * left end position: ** 105 * centisome position: ** 2.112251...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN] ==
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== Gene Tiso_gene_15547 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 4534
* ec number:
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* transcription direction:
** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
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** POSITIVE
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* left end position:
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** 105
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* centisome position:
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** 2.112251   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
** 1 [[DIHYDRONEOPTERIN-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[DIHYDRO-NEO-PTERIN]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: automated-name-match
** 1 7,8-dihydroneopterin 3'-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 7,8-dihydroneopterin[c]
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== Pathways associated ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6277]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13604]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2924]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17467]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8599]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4112]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3667]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_43]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12636]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5713]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10760]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_7067]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1142]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_277]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17804]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2747]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_2019]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10158]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_16712]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14428]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_8601]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6144]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11387]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_19075]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6767]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13784]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10288]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1799]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12514]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15988]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_18343]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13729]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_15582]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3314]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4645]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13847]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8600]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16176]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=4534}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25306 25306]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=105}}
** [http://www.genome.jp/dbget-bin/www_bget?R04621 R04621]
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{{#set: centisome position=2.112251    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=UNSPECIFIC-MONOOXYGENASE-RXN}}
{{#set: ec number=EC-3.6.1}}
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{{#set: gene associated=Tiso_gene_6277|Tiso_gene_13604|Tiso_gene_2924|Tiso_gene_17467|Tiso_gene_8599|Tiso_gene_4112|Tiso_gene_3667|Tiso_gene_43|Tiso_gene_12636|Tiso_gene_5713|Tiso_gene_10760|Tiso_gene_7067|Tiso_gene_1142|Tiso_gene_277|Tiso_gene_17804|Tiso_gene_2747|Tiso_gene_2019|Tiso_gene_10158|Tiso_gene_16712|Tiso_gene_14428|Tiso_gene_8601|Tiso_gene_6144|Tiso_gene_11387|Tiso_gene_19075|Tiso_gene_6767|Tiso_gene_13784|Tiso_gene_10288|Tiso_gene_1799|Tiso_gene_12514|Tiso_gene_15988|Tiso_gene_18343|Tiso_gene_13729|Tiso_gene_15582|Tiso_gene_3314|Tiso_gene_4645|Tiso_gene_13847|Tiso_gene_8600|Tiso_gene_16176}}
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{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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Latest revision as of 19:56, 21 March 2018

Gene Tiso_gene_15547

  • right end position:
    • 4534
  • transcription direction:
    • POSITIVE
  • left end position:
    • 105
  • centisome position:
    • 2.112251
  • Synonym(s):

Reactions associated

Pathways associated

External links