Difference between revisions of "ISOCHORSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-304 RXN66-304] == * direction: ** LEFT-TO-RIGHT * common name: ** 14-hydroxylanosterol 14-deh...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] == * direction: ** REVERSIBLE * common name: ** isochorismate_syntha...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-304 RXN66-304] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 14-hydroxylanosterol 14-dehydrogenase
+
** isochorismate_synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/5.4.4.2 EC-5.4.4.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-4568]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CPD-4573]][c]
+
** 1 [[CHORISMATE]][c] '''<=>''' 1 [[ISOCHORISMATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 14-hydroxylanosterol[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 2 H2O[c] '''+''' 1 14-oxolanosterol[c]
+
** 1 chorismate[c] '''<=>''' 1 isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8263]]
+
* Gene: [[Tiso_gene_14767]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_17551]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
+
* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
−
** '''8''' reactions found over '''22''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
+
* [[PWY-5901]], 2,3-dihydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5901 PWY-5901]
−
** '''7''' reactions found over '''22''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6406]], salicylate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6406 PWY-6406]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=14-hydroxylanosterol 14-dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18985 18985]
−
{{#set: gene associated=Tiso_gene_8263}}
+
* LIGAND-RXN:
−
{{#set: in pathway=PWY66-341|PWY66-4}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01717 R01717]
−
{{#set: reconstruction category=orthology}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P23973 P23973]
−
{{#set: reconstruction source=esiliculosus}}
+
** [http://www.uniprot.org/uniprot/P44613 P44613]
 +
** [http://www.uniprot.org/uniprot/P74053 P74053]
 +
** [http://www.uniprot.org/uniprot/P0AEJ2 P0AEJ2]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=isochorismate_synthase}}
 +
{{#set: ec number=EC-5.4.4.2}}
 +
{{#set: gene associated=Tiso_gene_14767|Tiso_gene_17551}}
 +
{{#set: in pathway=PWY-5837|PWY-5901|PWY-6406}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction ISOCHORSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • isochorismate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5901, 2,3-dihydroxybenzoate biosynthesis: PWY-5901
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6406, salicylate biosynthesis I: PWY-6406
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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