Difference between revisions of "R03845"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** PSase ** geranylgerany...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R03845 R03845] == * direction: ** LEFT-TO-RIGHT * common name: ** R127 * Synonym(s): == Reaction F...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R03845 R03845] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** R127
 
* Synonym(s):
 
* Synonym(s):
** PSase
 
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-464]][c]
+
** 1.0 [[PROTON]][c] '''+''' 1.0 [[MONO-VINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1.0 [[NADPH]][c] '''=>''' 1.0 [[Chlorophyllides]][c] '''+''' 1.0 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
** 2 geranylgeranyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 prephytoene diphosphate[c]
+
** 1.0 H+[c] '''+''' 1.0 protochlorophyllide a[c] '''+''' 1.0 NADPH[c] '''=>''' 1.0 a chlorophyllide[c] '''+''' 1.0 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_15914]]
+
* Gene: [[Tiso_gene_10077]]
** [[pantograph]]-[[synechocystis]]
+
** Source: [[orthology-synechocystis]]
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_17141]]
 +
** Source: [[orthology-synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P53609 P53609]
 
** [http://www.uniprot.org/uniprot/P37295 P37295]
 
** [http://www.uniprot.org/uniprot/P22872 P22872]
 
** [http://www.uniprot.org/uniprot/P53610 P53610]
 
** [http://www.uniprot.org/uniprot/P53612 P53612]
 
** [http://www.uniprot.org/uniprot/P17056 P17056]
 
** [http://www.uniprot.org/uniprot/P49293 P49293]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
+
{{#set: common name=R127}}
{{#set: gene associated=Tiso_gene_15914}}
+
{{#set: gene associated=Tiso_gene_10077|Tiso_gene_17141}}
{{#set: in pathway=PWY-6287|PWY-6475}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=synechocystis|esiliculosus}}
 

Latest revision as of 19:57, 21 March 2018

Reaction R03845

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • R127
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links