Difference between revisions of "RXN-1225"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_6741 == * left end position: ** 121 * transcription direction: ** POSITIVE * right end position: ** 1104 * centisome position: ** 1.01809...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_sy...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** digalactosyldiacylglycerol_synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241] |
| − | * | + | |
| − | ** 1. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 an α,β-digalactosyldiacylglycerol[c] '''+''' 1 H+[c] '''+''' 1 UDP[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2142]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_106]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_11479]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7666]], galactolipid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7666 PWY-7666] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10520 10520] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=digalactosyldiacylglycerol_synthase}} | ||
| + | {{#set: ec number=EC-2.4.1.241}} | ||
| + | {{#set: gene associated=Tiso_gene_2142|Tiso_gene_106|Tiso_gene_11479}} | ||
| + | {{#set: in pathway=PWY-401|PWY-7666}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:57, 21 March 2018
Contents
Reaction RXN-1225
- direction:
- LEFT-TO-RIGHT
- common name:
- digalactosyldiacylglycerol_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 D-Galactosyl-12-diacyl-glycerols[c] + 1 CPD-14553[c] => 1 Galactosyl-galactosyl-diacyl-glycerols[c] + 1 PROTON[c] + 1 UDP[c]
- With common name(s):
- 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] + 1 UDP-α-D-galactose[c] => 1 an α,β-digalactosyldiacylglycerol[c] + 1 H+[c] + 1 UDP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2142
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_106
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_11479
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
Pathways
- PWY-401, galactolipid biosynthesis I: PWY-401
- 5 reactions found over 5 reactions in the full pathway
- PWY-7666, galactolipid biosynthesis II: PWY-7666
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
