Difference between revisions of "Tiso gene 10446"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] == * direction: ** REVERSIBLE * common name: ** cysteine_synthase ** cog00...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10446 == * right end position: ** 4440 * transcription direction: ** NEGATIVE * left end position: ** 3294 * centisome position: ** 38.5985...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] ==
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== Gene Tiso_gene_10446 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 4440
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* common name:
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* transcription direction:
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** cysteine_synthase
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** NEGATIVE
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** cog0031:_cysteine_synthase
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* left end position:
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** cysteine
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** 3294
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
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** 38.598545   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[S-FORMYLGLUTATHIONE-HYDROLASE-RXN]]
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** 1 [[ACETYLSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[CYS]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 O-acetyl-L-serine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 L-cysteine[c] '''+''' 1 acetate[c] '''+''' 1 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_6110]]
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* [[PWY-1801]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_12184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2283]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_819]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17043]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7852]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4440}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14829 14829]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3294}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00897 R00897]
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{{#set: centisome position=38.598545    }}
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* UNIPROT:
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{{#set: reaction associated=S-FORMYLGLUTATHIONE-HYDROLASE-RXN}}
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** [http://www.uniprot.org/uniprot/P31300 P31300]
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{{#set: pathway associated=PWY-1801}}
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** [http://www.uniprot.org/uniprot/Q43153 Q43153]
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** [http://www.uniprot.org/uniprot/O67507 O67507]
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** [http://www.uniprot.org/uniprot/P47998 P47998]
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** [http://www.uniprot.org/uniprot/Q9V1Q3 Q9V1Q3]
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** [http://www.uniprot.org/uniprot/Q9RW80 Q9RW80]
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** [http://www.uniprot.org/uniprot/P56067 P56067]
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** [http://www.uniprot.org/uniprot/P63873 P63873]
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** [http://www.uniprot.org/uniprot/Q9CI26 Q9CI26]
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** [http://www.uniprot.org/uniprot/Q9ZMW6 Q9ZMW6]
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** [http://www.uniprot.org/uniprot/P45040 P45040]
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** [http://www.uniprot.org/uniprot/Q9WZD3 Q9WZD3]
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** [http://www.uniprot.org/uniprot/Q9CHF0 Q9CHF0]
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** [http://www.uniprot.org/uniprot/P0A534 P0A534]
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** [http://www.uniprot.org/uniprot/P71128 P71128]
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** [http://www.uniprot.org/uniprot/O05393 O05393]
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** [http://www.uniprot.org/uniprot/O34476 O34476]
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** [http://www.uniprot.org/uniprot/Q9JQL6 Q9JQL6]
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** [http://www.uniprot.org/uniprot/P38076 P38076]
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** [http://www.uniprot.org/uniprot/Q7M1J2 Q7M1J2]
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** [http://www.uniprot.org/uniprot/P29848 P29848]
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** [http://www.uniprot.org/uniprot/P32260 P32260]
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** [http://www.uniprot.org/uniprot/Q00834 Q00834]
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** [http://www.uniprot.org/uniprot/Q43317 Q43317]
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** [http://www.uniprot.org/uniprot/P47999 P47999]
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** [http://www.uniprot.org/uniprot/Q43726 Q43726]
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** [http://www.uniprot.org/uniprot/P80608 P80608]
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** [http://www.uniprot.org/uniprot/Q59447 Q59447]
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** [http://www.uniprot.org/uniprot/P53206 P53206]
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** [http://www.uniprot.org/uniprot/P37887 P37887]
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** [http://www.uniprot.org/uniprot/Q59529 Q59529]
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** [http://www.uniprot.org/uniprot/P0A1E3 P0A1E3]
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** [http://www.uniprot.org/uniprot/P0ABK5 P0ABK5]
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** [http://www.uniprot.org/uniprot/P16703 P16703]
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** [http://www.uniprot.org/uniprot/O81154 O81154]
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** [http://www.uniprot.org/uniprot/O81155 O81155]
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** [http://www.uniprot.org/uniprot/O81523 O81523]
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** [http://www.uniprot.org/uniprot/Q93244 Q93244]
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** [http://www.uniprot.org/uniprot/O45679 O45679]
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** [http://www.uniprot.org/uniprot/Q9S2H1 Q9S2H1]
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** [http://www.uniprot.org/uniprot/P87131 P87131]
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** [http://www.uniprot.org/uniprot/Q9XDU7 Q9XDU7]
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** [http://www.uniprot.org/uniprot/Q9UWP0 Q9UWP0]
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** [http://www.uniprot.org/uniprot/O32978 O32978]
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** [http://www.uniprot.org/uniprot/Q9RAS8 Q9RAS8]
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** [http://www.uniprot.org/uniprot/Q9S757 Q9S757]
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** [http://www.uniprot.org/uniprot/Q9S6Z7 Q9S6Z7]
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** [http://www.uniprot.org/uniprot/Q43725 Q43725]
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** [http://www.uniprot.org/uniprot/Q9SMY4 Q9SMY4]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=cysteine_synthase}}
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{{#set: common name=cog0031:_cysteine_synthase}}
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{{#set: common name=cysteine}}
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{{#set: ec number=EC-2.5.1.47}}
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{{#set: gene associated=Tiso_gene_6110|Tiso_gene_12184|Tiso_gene_2283|Tiso_gene_819|Tiso_gene_17043|Tiso_gene_7852}}
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{{#set: in pathway=CYSTSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:58, 21 March 2018

Gene Tiso_gene_10446

  • right end position:
    • 4440
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3294
  • centisome position:
    • 38.598545
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10446&oldid=44959"