Difference between revisions of "RXN-11351"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.113-RXN 3.2.1.113-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_alpha-mann...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11351 RXN-11351] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.113-RXN 3.2.1.113-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11351 RXN-11351] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** probable_alpha-mannosidase_i_mns5
+
** beta-lactamase
−
** mannosyl-oligosaccharide_-alpha-mannosidase_mns2
+
−
** class_member_1
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.113 EC-3.2.1.113]
+
** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Mannosyl9-Nacetylglucosaminyl2]][c] '''=>''' 1 [[Mannosyl8-Nacetylglucosaminyl2]][c] '''+''' 1 [[MANNOSE]][c]
+
** 3 [[WATER]][c] '''+''' 2 [[CPD-12310]][c] '''=>''' 1 [[CPD-12311]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 4 [[D-ALANINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a (mannosyl)9-(N-acetylglucosaminyl)2[c] '''=>''' 1 a (mannosyl)8-(N-acetylglucosaminyl)2[c] '''+''' 1 D-mannose[c]
+
** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (E. faeciums)[c] '''=>''' 1 a peptidoglycan with D,D cross-link (E. faecium)[c] '''+''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c] '''+''' 1 H+[c] '''+''' 4 D-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4788]]
+
* Gene: [[Tiso_gene_18870]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11681]]
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−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2719]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6471]], peptidoglycan biosynthesis IV (Enterococcus faecium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6471 PWY-6471]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P45700 P45700]
 
−
** [http://www.uniprot.org/uniprot/P33908 P33908]
 
−
** [http://www.uniprot.org/uniprot/P31723 P31723]
 
−
** [http://www.uniprot.org/uniprot/O02773 O02773]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=probable_alpha-mannosidase_i_mns5}}
+
{{#set: common name=beta-lactamase}}
−
{{#set: common name=mannosyl-oligosaccharide_-alpha-mannosidase_mns2}}
+
{{#set: ec number=EC-3.4.16.4}}
−
{{#set: common name=class_member_1}}
+
{{#set: gene associated=Tiso_gene_18870}}
−
{{#set: ec number=EC-3.2.1.113}}
+
{{#set: in pathway=PWY-6471}}
−
{{#set: gene associated=Tiso_gene_4788|Tiso_gene_11681|Tiso_gene_2719}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:58, 21 March 2018

Reaction RXN-11351

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-lactamase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 3 H2O[c] + 2 a peptidoglycan dimer (E. faeciums)[c] => 1 a peptidoglycan with D,D cross-link (E. faecium)[c] + 1 di-trans,octa-cis-undecaprenyl diphosphate[c] + 1 H+[c] + 4 D-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6471, peptidoglycan biosynthesis IV (Enterococcus faecium): PWY-6471
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11351&oldid=44978"