Difference between revisions of "Tiso gene 2365"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2365 == * right end position: ** 10419 * transcription direction: ** NEGATIVE * left end position: ** 6551 * centisome position: ** 33.2116...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13441 RXN-13441] ==
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== Gene Tiso_gene_2365 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10419
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
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** NEGATIVE
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* left end position:
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** 6551
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* centisome position:
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** 33.211662   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CPD-14422]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 α-linolenoyl-CoA[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
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* Reaction: [[RXN-15509]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways ==
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* Reaction: [[RXN-15510]]
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
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** Source: [[annotation-in-silico_annotation]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
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* Reaction: [[RXN-15511]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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*** Assignment: ec-number
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RXN-15512]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[annotation]]:
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*** Assignment: ec-number
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** [[pathwaytools]]:
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* Reaction: [[RXN-15513]]
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*** [[in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY-2221]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-7218]]
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* [[PWY-6405]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[PWY66-399]]
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* [[PWY-5723]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=10419}}
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{{#set: ec number=EC-2.3.1.199}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
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{{#set: left end position=6551}}
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{{#set: reconstruction category=annotation}}
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{{#set: centisome position=33.211662    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}

Latest revision as of 20:59, 21 March 2018

Gene Tiso_gene_2365

  • right end position:
    • 10419
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 6551
  • centisome position:
    • 33.211662
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2365&oldid=45060"