Difference between revisions of "CPD-15360"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase *...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15360 CPD-15360] == * smiles: ** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-]...")
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15360 CPD-15360] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))
 
* common name:
 
* common name:
** dihydroflavonol-4-reductase
+
** 2-thio-N6-dimethylallyladenosine37 in tRNA
* ec number:
+
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** tRNA-(2-thio-N6-dimethylallyladenosine37)
 +
** a tRNA containing 2-thio-N6-dimethylallyladenosine37
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[RXN-14481]]
** 1 [[CPD-7087]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
+
== Reaction(s) known to produce the compound ==
* With common name(s):
+
* [[RXN-14480]]
** 1 (+)-dihydromyricetin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
+
== Reaction(s) of unknown directionality ==
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_9503]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_11016]]
+
** [[pantograph]]-[[athaliana]]
+
* [[Tiso_gene_15272]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_9504]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
** [[pantograph]]-[[esiliculosus]]
+
== Pathways  ==
+
* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[esiliculosus]]
+
*** [[athaliana]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* CHEBI:
** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74416 74416]
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: smiles=CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))}}
{{#set: common name=dihydroflavonol-4-reductase}}
+
{{#set: common name=2-thio-N6-dimethylallyladenosine37 in tRNA}}
{{#set: ec number=EC-1.1.1.219}}
+
{{#set: common name=tRNA-(2-thio-N6-dimethylallyladenosine37)|a tRNA containing 2-thio-N6-dimethylallyladenosine37}}
{{#set: gene associated=Tiso_gene_9503|Tiso_gene_11016|Tiso_gene_15272|Tiso_gene_9504}}
+
{{#set: consumed by=RXN-14481}}
{{#set: in pathway=PWY-5152}}
+
{{#set: produced by=RXN-14480}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus|athaliana}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:09, 21 March 2018

Metabolite CPD-15360

  • smiles:
    • CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))
  • common name:
    • 2-thio-N6-dimethylallyladenosine37 in tRNA
  • Synonym(s):
    • tRNA-(2-thio-N6-dimethylallyladenosine37)
    • a tRNA containing 2-thio-N6-dimethylallyladenosine37

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))" cannot be used as a page name in this wiki.