Difference between revisions of "Tiso gene 16523"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_rna_helicase_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16523 == * right end position: ** 2224 * transcription direction: ** POSITIVE * left end position: ** 196 * centisome position: ** 4.556020...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
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== Gene Tiso_gene_16523 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2224
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* common name:
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* transcription direction:
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** atp-dependent_rna_helicase_ded1
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** POSITIVE
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** rna_helicase
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* left end position:
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** dead_box_rna_helicase
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** 196
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** ORF
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* centisome position:
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** dead_box_helicase
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** 4.5560203   
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** atp-dependent_rna_helicase-like_protein_db10
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13185]]
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** 1 [[Wound-RNA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Unwound-RNA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 wound RNA[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 an unwound RNA[c]
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* Reaction: [[RXN-7984]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-7985]]
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* [[Tiso_gene_13864]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_15465]]
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* [[PWY-5945]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14774]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17819]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13863]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5272]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11551]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13862]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9370]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17804]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2224}}
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{{#set: common name=atp-dependent_rna_helicase_ded1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=rna_helicase}}
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{{#set: left end position=196}}
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{{#set: common name=dead_box_rna_helicase}}
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{{#set: centisome position=4.5560203    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=RXN-13185|RXN-7984|RXN-7985}}
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{{#set: common name=dead_box_helicase}}
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{{#set: pathway associated=PWY-5945}}
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{{#set: common name=atp-dependent_rna_helicase-like_protein_db10}}
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{{#set: ec number=EC-3.6.4.13}}
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{{#set: gene associated=Tiso_gene_13864|Tiso_gene_15465|Tiso_gene_14774|Tiso_gene_17819|Tiso_gene_13863|Tiso_gene_5272|Tiso_gene_11551|Tiso_gene_13862|Tiso_gene_9370|Tiso_gene_17804}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:59, 21 March 2018

Gene Tiso_gene_16523

  • right end position:
    • 2224
  • transcription direction:
    • POSITIVE
  • left end position:
    • 196
  • centisome position:
    • 4.5560203
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16523&oldid=45126"