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− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.8-RXN 1.1.1.8-RXN] == | + | == Gene Tiso_gene_14211 == |
− | * direction: | + | * right end position: |
− | ** LEFT-TO-RIGHT | + | ** 4078 |
− | * common name: | + | * transcription direction: |
− | ** ORF | + | ** POSITIVE |
− | ** glycerol-3-phosphate_dehydrogenase | + | * left end position: |
− | * ec number: | + | ** 43 |
− | ** [http://enzyme.expasy.org/EC/1.1.1.8 EC-1.1.1.8] | + | * centisome position: |
| + | ** 0.7436873 |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers: | + | * Reaction: [[GLUTCYSLIG-RXN]] |
− | ** 1 [[NADH]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[GLYCEROL-3P]][c]
| + | ** Source: [[annotation-in-silico_annotation]] |
− | * With common name(s): | + | *** Assignment: ec-number |
− | ** 1 NADH[c] '''+''' 1 glycerone phosphate[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 sn-glycerol 3-phosphate[c]
| + | == Pathways associated == |
− | | + | * [[PWY-7255]] |
− | == Genes associated with this reaction ==
| + | * [[GLUTATHIONESYN-PWY]] |
− | Genes have been associated with this reaction based on different elements listed below.
| + | * [[PWY-6840]] |
− | * [[Tiso_gene_13013]]
| + | |
− | ** IN-SILICO_ANNOTATION | + | |
− | ***EC-NUMBER | + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | ** [[pantograph]]-[[creinhardtii]]
| + | |
− | * [[Tiso_gene_15777]]
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_6069]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | ** [[pantograph]]-[[creinhardtii]]
| + | |
− | * [[Tiso_gene_2810]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_2811]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[synechocystis]]
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_3718]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | ** [[pantograph]]-[[creinhardtii]]
| + | |
− | == Pathways == | + | |
− | * [[PWY-6118]], glycerol-3-phosphate shuttle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6118 PWY-6118] | + | |
− | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
− | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] | + | |
− | ** '''5''' reactions found over '''9''' reactions in the full pathway
| + | |
− | * [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411] | + | |
− | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
− | == Reconstruction information ==
| + | |
− | * [[orthology]]:
| + | |
− | ** [[pantograph]]:
| + | |
− | *** [[creinhardtii]]
| + | |
− | *** [[synechocystis]]
| + | |
− | *** [[esiliculosus]]
| + | |
− | * [[manual]]:
| + | |
− | ** [[primary_network]]
| + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[experimental_annotation]]
| + | |
− | *** [[in-silico_annotation]]
| + | |
| == External links == | | == External links == |
− | * LIGAND-RXN:
| + | {{#set: right end position=4078}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
| + | {{#set: transcription direction=POSITIVE}} |
− | * UNIPROT:
| + | {{#set: left end position=43}} |
− | ** [http://www.uniprot.org/uniprot/P13707 P13707]
| + | {{#set: centisome position=0.7436873 }} |
− | ** [http://www.uniprot.org/uniprot/P08507 P08507]
| + | {{#set: reaction associated=GLUTCYSLIG-RXN}} |
− | ** [http://www.uniprot.org/uniprot/O25614 O25614]
| + | {{#set: pathway associated=PWY-7255|GLUTATHIONESYN-PWY|PWY-6840}} |
− | ** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
| + | |
− | ** [http://www.uniprot.org/uniprot/P43798 P43798]
| + | |
− | ** [http://www.uniprot.org/uniprot/O29390 O29390]
| + | |
− | ** [http://www.uniprot.org/uniprot/P46919 P46919]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07735 P07735]
| + | |
− | ** [http://www.uniprot.org/uniprot/P13706 P13706]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q00055 Q00055]
| + | |
− | ** [http://www.uniprot.org/uniprot/P34517 P34517]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
| + | |
− | ** [http://www.uniprot.org/uniprot/P21695 P21695]
| + | |
− | ** [http://www.uniprot.org/uniprot/P41911 P41911]
| + | |
− | ** [http://www.uniprot.org/uniprot/P90593 P90593]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=ORF}} | + | |
− | {{#set: common name=glycerol-3-phosphate_dehydrogenase}} | + | |
− | {{#set: ec number=EC-1.1.1.8}} | + | |
− | {{#set: gene associated=Tiso_gene_13013|Tiso_gene_15777|Tiso_gene_6069|Tiso_gene_2810|Tiso_gene_2811|Tiso_gene_3718}} | + | |
− | {{#set: in pathway=PWY-6118|PWY-7385|PWY-7411}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
| + | |
− | {{#set: reconstruction category=manual}}
| + | |
− | {{#set: reconstruction source=primary_network}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |