Difference between revisions of "LYSINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16561 RXN-16561] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16561 RXN-16561] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** lysine--trna_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.155 EC-2.3.1.155]
+
** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-17815]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-17464]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (11Z)-3-oxo-hexadecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (9Z)-tetradecenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 ATP[c] '''+''' 1 L-lysine[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-lysyl-[tRNAlys][c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6705]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16635]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P41258 P41258]
 +
** [http://www.uniprot.org/uniprot/P46861 P46861]
 +
** [http://www.uniprot.org/uniprot/P47382 P47382]
 +
** [http://www.uniprot.org/uniprot/O57963 O57963]
 +
** [http://www.uniprot.org/uniprot/O51603 O51603]
 +
** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
 +
** [http://www.uniprot.org/uniprot/O83650 O83650]
 +
** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
 +
** [http://www.uniprot.org/uniprot/P43825 P43825]
 +
** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
 +
** [http://www.uniprot.org/uniprot/O84786 O84786]
 +
** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
 +
** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
 +
** [http://www.uniprot.org/uniprot/P56126 P56126]
 +
** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
 +
** [http://www.uniprot.org/uniprot/O67258 O67258]
 +
** [http://www.uniprot.org/uniprot/O84002 O84002]
 +
** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
 +
** [http://www.uniprot.org/uniprot/P32048 P32048]
 +
** [http://www.uniprot.org/uniprot/P37879 P37879]
 +
** [http://www.uniprot.org/uniprot/Q48986 Q48986]
 +
** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
 +
** [http://www.uniprot.org/uniprot/P37477 P37477]
 +
** [http://www.uniprot.org/uniprot/P75500 P75500]
 +
** [http://www.uniprot.org/uniprot/P95970 P95970]
 +
** [http://www.uniprot.org/uniprot/P73443 P73443]
 +
** [http://www.uniprot.org/uniprot/P15180 P15180]
 +
** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
 +
** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
 +
** [http://www.uniprot.org/uniprot/Q43776 Q43776]
 +
** [http://www.uniprot.org/uniprot/O74059 O74059]
 +
** [http://www.uniprot.org/uniprot/O30522 O30522]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.155}}
+
{{#set: common name=lysine--trna_ligase}}
−
{{#set: in pathway=PWY-7656}}
+
{{#set: ec number=EC-6.1.1.6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_6705|Tiso_gene_16635}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction LYSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lysine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-lysine[c] + 1 a tRNAlys[c] => 1 diphosphate[c] + 1 an L-lysyl-[tRNAlys][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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