Difference between revisions of "Tiso gene 7800"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_7800 == * right end position: ** 9172 * transcription direction: ** POSITIVE * left end position: ** 8299 * centisome position: ** 76.82837...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] ==
+
== Gene Tiso_gene_7800 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 9172
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
+
** 8299
 +
* centisome position:
 +
** 76.82837   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ALDEHYDE-REDUCTASE-RXN]]
−
** 2 [[WATER]][c] '''+''' 1 [[CTP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CMP]][c] '''+''' 2 [[Pi]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 2 H2O[c] '''+''' 1 CTP[c] '''=>''' 2 H+[c] '''+''' 1 CMP[c] '''+''' 2 phosphate[c]
+
* Reaction: [[RXN-12078]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-14102]]
−
* [[Tiso_gene_20236]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: automated-name-match
−
* [[Tiso_gene_12899]]
+
* Reaction: [[RXN-8772]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: automated-name-match
−
** EXPERIMENTAL_ANNOTATION
+
* Reaction: [[RXN-8773]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
== Pathways  ==
+
*** Assignment: automated-name-match
−
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
+
== Pathways associated ==
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5515]]
−
* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
+
* [[PWY-5516]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6693]]
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=9172}}
−
{{#set: common name=ORF}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-3.6.1.5}}
+
{{#set: left end position=8299}}
−
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
+
{{#set: centisome position=76.82837    }}
−
{{#set: in pathway=PWY-7185|PWY-7177}}
+
{{#set: reaction associated=ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:02, 21 March 2018

Gene Tiso_gene_7800

  • right end position:
    • 9172
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8299
  • centisome position:
    • 76.82837
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7800&oldid=45457"